Gene Apre_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1621 
Symbol 
ID8398433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1767713 
End bp1768105 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content39% 
IMG OID644995985 
ProductRbsD or FucU transport 
Protein accessionYP_003153363 
Protein GI257067107 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1869] ABC-type ribose transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA AAGGAATTTT AAATAGCGAT ATAGCAAAGG GCCTTGCTGA TTTGGGCCAT 
ATGGACCTTA TAGCTGTAGG AGATTGTGGT CTTCCAATAG ATAATGACAA GAAGATCGAC
CTTGCCCTAA AGCTCGGCGA GCCTAAGTTT ATAGATGTAC TTGAAGTCTT GTTGGAAGAT
TTTTCTGTGG AGTATTATTA CTTGGCAGAA GAGATAAAAA CAGAAAACCC AGACCAAGAA
AGGGCTATAG CCGAACTTCT CCCTGGGGTA GACAAGGAAT ATATAAGCCA TGAAGACTTC
AAGAAGAAGC TTAAGGAGAC CAAATTTGTA ATAAGGACAG GAGAAAACAC CGCCTATTCC
AATATTATTC TTCGAAGTAA AAACATCTTT TAG
 
Protein sequence
MKLKGILNSD IAKGLADLGH MDLIAVGDCG LPIDNDKKID LALKLGEPKF IDVLEVLLED 
FSVEYYYLAE EIKTENPDQE RAIAELLPGV DKEYISHEDF KKKLKETKFV IRTGENTAYS
NIILRSKNIF