| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1611 |
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| Symbol | |
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| ID | 8398423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1756693 |
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| End bp | 1757982 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644995975 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_003153353 |
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| Protein GI | 257067097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0467023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCTAT TAGTATTTAT AATATCATTA TTAGGATCGA TGGCGATAGG CTTACCAATT
GCATTTGCTT TGATATTTAG TGGTGTAAGC ATGTTAGCTT ATCTAAACGG ATTTGATGTT
CAAATAATTT CTCAAAATAT GTTCAATGGA GCTGATAGTT ATTCTATGAT GGCCTTGCCA
TTCTTTATGT TAGCAGGAGA TCTTATGAAC AGAGGTGGCC TTACTAATAG ACTTGTTAAT
GCTGCAAGTG CTTGGGTAGG CCATTTTAGA GGTGGATTAG GTTATGTAAC AATAATAGCA
ACACTATTAT TTGCTAGTAT GGTTGGATCA GCTGTTGCAT CTACTGCTGC TTTAGGAGGG
ATTTTAATCC CTATGATGGT TAAGGCTAAT TATGATAGGG AGGATGCTAC AGGACTTGTT
GCTGCTTCAA ACTTATTATC GCCGATAATG CCACCATCCG CTCCAATGAT AGTTTTAGGC
GTTACAGCAA GTATACCTGT TTCACATTTA TTTTTAGCAG GAGTTGCTCC AGCAATATAT
ATATCCGCTG GCTTAGCGAT AATGTGGTTT ATAGTAGCTA AAAAAAGAAA CATAGCCCCA
TTGCCAAAAG AACCCTTTGA AGAAAGAATG AAGGCGACTA GGGATGCAAT TTGGGCAATA
TTAATGCCAG TTGGTATTTT AGTTGGACTT CAAACAGGAG TTTTCACTCC TACGGAAGCA
GGTGTTGTCG CAGTAGTTTA TTCATTAATT ATAGGACTAG TTGTTTATAG AGAGTTAAAC
TTTAGAGATT TATTAGATGG ATTAATATCT TCTGCTAAAT CTTCAGCTGC TATTATGTTT
TTAGTTGCAG CTTCAGCTAT TTCTTCTTGG GTAATGACTG TTGCGAATAT TCCGGTTTTA
GTTTCAAACT TACTTCATCC TTTTGTAGGA AGCCCTAGAA TTTTGATGCT TATTATATTG
GGATTAATTT TGATAATAGG AACCGCAATG GATGTAAATC CTACTATACT AATTTTAGCT
CCTGTAGTAC TACCAGTTAT TAAAGAAGCA GGTATTAATG AAGTTTACTT TGGTGTTGTA
TTTGTTATAT CAATAGTAAT GGGATTGCTA ACTCCTCCAG TTGGAACGGT TCTTAATGTG
GCTAGTGCTG CAGGTGGAAT CACTATGGAA AAGGTTGTGA AATCAGTATT ACCGTTTTTA
ATTGTAGAAG TTATTATAAT TCTATTAATG ATAATATTTC CACAAATAGT AATAGTTCCT
TTTGAGTTAC TATCAGGTGT TCAGGTATAA
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| Protein sequence | MTLLVFIISL LGSMAIGLPI AFALIFSGVS MLAYLNGFDV QIISQNMFNG ADSYSMMALP
FFMLAGDLMN RGGLTNRLVN AASAWVGHFR GGLGYVTIIA TLLFASMVGS AVASTAALGG
ILIPMMVKAN YDREDATGLV AASNLLSPIM PPSAPMIVLG VTASIPVSHL FLAGVAPAIY
ISAGLAIMWF IVAKKRNIAP LPKEPFEERM KATRDAIWAI LMPVGILVGL QTGVFTPTEA
GVVAVVYSLI IGLVVYRELN FRDLLDGLIS SAKSSAAIMF LVAASAISSW VMTVANIPVL
VSNLLHPFVG SPRILMLIIL GLILIIGTAM DVNPTILILA PVVLPVIKEA GINEVYFGVV
FVISIVMGLL TPPVGTVLNV ASAAGGITME KVVKSVLPFL IVEVIIILLM IIFPQIVIVP
FELLSGVQV
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