| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1609 |
|---|
| Symbol | |
|---|
| ID | 8398421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1752850 |
|---|
| End bp | 1754955 |
|---|
| Gene Length | 2106 bp |
|---|
| Protein Length | 701 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644995973 |
|---|
| Product | alpha-1,2-mannosidase |
|---|
| Protein accession | YP_003153351 |
|---|
| Protein GI | 257067095 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
|---|
| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TTGATGAAAT ATTAAAAGAT ATAAGATACA CGGATACTAG GATAGGGACA
GCTTCTGTGA GAGACTTCTC TAATGGCAAT ACCCTCCCCT TGTGTGGGCT GCCCCATGGA
AACAATTATC TTACATTGAT GACTAGGGAT GATGGAAGTT TCTTCTTTCA TCCAGAAGAT
GAAGATCTCC TTGCCTTTCG TATAAGCCAT CAGCCTAGTC CTTGGATGGG AGATTTTTCC
TATATCAATA TCCTCCCCTA CACTGATAAT GAAAATATAA GTTATGACAT AGAAAAATCA
TTATTTAGAC CGAATTTTCT TAAAATTTCT TACAAGAAAG GGACAAGCGT CCTAGCTTCT
ATAATGGATT TGGGAGGAGT GATTAAGTCT TGTGGAAACT CTTCTTTTAA GATATTTGCA
AAGGGTCTAA GTTTAGAGAA GGATGGAGAC TTCCTAGAAG GCTTTGTAAG TAATTACGCA
GCTTGTGAGG ATAAGAATCT TAAGATGTAT ATCAGAATTG GTCTATCAAA TGAATTTGAG
TTTTCTTTCG AGAAAGGATG CTACTATGTA AAGACAAGTA GTGAGGATCT TTTTCTTAAG
TTTGCAACGT CTTTCATCTC AACTGATCAA GTGAGATATA ATTATGAGAA AATCCCTGAT
GATCTTGAAA TTATTATCGA AGAATCTAAA AAGGCTTGGG ATAAATATTT GGATATCTTT
CAAATAGAAG ACACCGACTA CGAGGATAAT TTCCAAAAAT TTACCCCTTA CAAGAAGATA
GACAAGATCA AGTTTTTCTA CCATGCAGTC TACAGAGCCT TCCTATTTCC TATGAAATTC
TTTGAGCAAG ATAAGGGAAA ACAGGATATC TATTACGATA CCCATTCTAA ATCCGTAAAA
AGGGGAAAGT TTTATACAAA TATTGGCTTT TGGGATGGAC AGAAGACCCT CTTTCCCCTC
CTTAGTCTAG TAGCAAAAGA CGACCTGTCT GATATTCTAG AAGGAATACT GAACTTCTAC
CGTGATACTG GCTATCTTCC AAAGTGGCTT TCACCAGATG AGAGGGGGCT TATGCCAGGA
ACCTTGGTTG AAAATGTGAT TGCTGATGCC CTTACTAAGG GAATTGCTAT CGATAAGAAG
GAAATTTTCC TAAAAGCCTT GCTGGATGCA GCTGAAAAGG AAGCTGAAGA TGATAGATAT
GGTCGTTTCA AGGCCAAAAC TTACAGGAAG CTGGGATATG TTCCATCAGA CTTCCACGAA
TCTGTAAATC AGACTCTAGA TAATAGCATG GCGGATTTTT CTATAGGAAG GGTCGCAGAG
CTTTGCGGTA AAGAGGACTT GGCAGAAAAG TACTACTCAT ACTCCAGAAA TTGGGAGAAG
CTCTTTGATT ACGAGACTAA GTTTCTTAGG GCAAAGAATA GAGAAGGAAA TTTTGTAGGA
GATTTTGATC CGCTTTCCTG GGGTTCTCCC TACACAGAAG GTTCAGCCTT CCAGAATTCC
TACAATTGCT ACCATGACTT TCCTAGATTG ATAGAGCTTT TTGGAGGAGA AGATAATTTT
GAAGATAGAC TTGATCAGAT GATAAATGCG GATTCTAGGT ATAATGTAGG ATCTTATGGA
TATGATATCC ATGAAATGAT CGAGATGAGT GATGCCCATT TTGGTCAATT TGCCATATCG
AACCAACCTT CCTTTCATCT TCCTTACCTA TACAATTTAG TCGGAAAGTA TTGGAAGAGT
GAAATTTTAG TAAAGACTTT GATGAGAGAT TATTTTTCCT ATAACTTTAG GGGTTTTCCT
GGAGATGAGG ATAATGGGTC TATGGCATCT TGGTTTATCC TATCGGCTAT GGGAATTTAT
CCTATCGCTC CAGCAAGTGG ATTTTATGAA ATGGGCATAA GCCTTTTTGA TAAGATGAAG
GTGAAGCTTT CTTCAGGAAA TACTATAGAA ATCAGGACTG AGGAAAACTA TCCCCACAAG
AATTTTGTCA AAGATATCAA AGTAGACGGG AAAATCTTAG GAGGAAAAAG AATAAGTCAC
GAGGACTTTA TAAGGGCGAG GGAGATAGTC TTTAGCTTGA ATATACTTCC GGAAGGGATA
CTATGA
|
|---|
| Protein sequence | MKIIDEILKD IRYTDTRIGT ASVRDFSNGN TLPLCGLPHG NNYLTLMTRD DGSFFFHPED
EDLLAFRISH QPSPWMGDFS YINILPYTDN ENISYDIEKS LFRPNFLKIS YKKGTSVLAS
IMDLGGVIKS CGNSSFKIFA KGLSLEKDGD FLEGFVSNYA ACEDKNLKMY IRIGLSNEFE
FSFEKGCYYV KTSSEDLFLK FATSFISTDQ VRYNYEKIPD DLEIIIEESK KAWDKYLDIF
QIEDTDYEDN FQKFTPYKKI DKIKFFYHAV YRAFLFPMKF FEQDKGKQDI YYDTHSKSVK
RGKFYTNIGF WDGQKTLFPL LSLVAKDDLS DILEGILNFY RDTGYLPKWL SPDERGLMPG
TLVENVIADA LTKGIAIDKK EIFLKALLDA AEKEAEDDRY GRFKAKTYRK LGYVPSDFHE
SVNQTLDNSM ADFSIGRVAE LCGKEDLAEK YYSYSRNWEK LFDYETKFLR AKNREGNFVG
DFDPLSWGSP YTEGSAFQNS YNCYHDFPRL IELFGGEDNF EDRLDQMINA DSRYNVGSYG
YDIHEMIEMS DAHFGQFAIS NQPSFHLPYL YNLVGKYWKS EILVKTLMRD YFSYNFRGFP
GDEDNGSMAS WFILSAMGIY PIAPASGFYE MGISLFDKMK VKLSSGNTIE IRTEENYPHK
NFVKDIKVDG KILGGKRISH EDFIRAREIV FSLNILPEGI L
|
|---|
| |