Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1603 |
Symbol | |
ID | 8398415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1744733 |
End bp | 1746397 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644995967 |
Product | alpha amylase catalytic region |
Protein accession | YP_003153345 |
Protein GI | 257067089 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000968128 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAA AGTGGTGGCA GAAGGAAATT GTTTATCAGA TTTATCCTAG GTCTTTCAAG GACTCGAACA ATGACGGGAT AGGAGATATT AGGGGAATTG TTGAAAAACT TGATTACTTG AAGGACTTGG GCATTACTAT GATTTGGCTT TGCCCGATTT ATAAGTCCCC TATGGCCGAC AATGGTTATG ACATTTCTGA TTATTTCGAT ATCAATGAAG AGTTTGGCAA CATGGAAGAC TTTGATCTTT TGGTTGAAGA AGCGAAAAAA AGAGATATCA AGGTCATGAT GGACCTTGTC CTAAACCACA CTTCCAACGA ACATGAGTGG TTTAAGGAGG CGATATCAGA TAAGGATAGT CCTTACAGGA ATTATTATAT AATTAGAGAA GGGAAAGAGC CTCCAAACAA CTGGAGATCA ATCTTTGGTG GATCTACCTG GACTAAGATT GATGGAGAAG ATGCCTATTA TCTCCACTCC TTTGCCAAGG AGCAGCCAGA TCTCAATTGG GAAAACCCTA AGCTTAGAGA AGAAGTGATT AATATCGTCA ATTTCTGGAT TGATAAGGGA ATTACAGCCT TTAGAATGGA TGCAATCAAC CACATAAAGA AAGATCCTTC ATATAAAAGT GGAGATCCAG ACGGGGCTGA TGGCAGAGTT TCTGTCGTAA AATTCGGTAG AAATCAAGAT GGAGTCGAAG AACTCATAAG GATCCTTTCA GATAATACTT TCAAGATCCA CGATTCGATG ACTGTGGGCG AGACTGCTGG TCTTTCTTAT GACAAGTATG CAAACTACAT CGGTGATGAT GGGGTATTTT CCATGGTATT TGACTTTATC CCAGCAAACT TCGACGTGGT CGAAGAAACT TGGTACAAGA GACTTGACTG GAAGGTAAGT GACTTTAGAA AGTCAATTTT CGATAGTCAA GAGTCAATCC AAAAATACGG CTGGTCAGCA AATTTCATAG AAAACCACGA CCAACCAAGG GCTACTACCA AGATTTTAAG GGAAAAGGAC GAGGATATTG ATGCTATAAA GATGCTTGGA GGAATTTATT TCTTCTTTAG GGGAACTCCT TATATCTACC AAGGCCAAGA GCTCGGTATG AAAAACTTCG TAAGAGAATC ACCAGACGAC TTCCAAGACA TCCAATCCAT AGACTCTTAT AAGAGATCGC TTGAAGAAGG ATTTAGCGAG AAGGAAGCCC TCTACTTCAC CAACCTCAGA AGCAGGGACA ACCCAAGAGT TCCTTTCGCC TGGACTAATG AAAAGTACGG AGGCTTCTCA GAAACTAAAC CTTGGCTTGC CATGGCCTAC GATAATCCTA AAGTAAATGC TGAGGATGAA GAAAAGGATA AGGATTCTGT CCTAAACTTC TACAAAAAAA TGATAGACTT TAGGCAAAAT AGCCAGTATT CTGATATCCT AATCTATGGA GACTTCAAGC CTTTGGAAGG TTTTGATGAT GAAATAATAG CCTACGAAAG AATCCTAGAT GGTAAAAAAC TAGAAATTAT CGCCAACTTC TCAGATGAAG AAAAGAAAAT AGAAGCAAGG GGTAAGGATA TAATCTTTTC CAACTCAAAG GGAGAGATTG AAGGAGATAT CTTAAGCTTA AATCCATATA GTTTTGTAAT ATTAAAGAAT AAAAATAATA AATAA
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Protein sequence | MQKKWWQKEI VYQIYPRSFK DSNNDGIGDI RGIVEKLDYL KDLGITMIWL CPIYKSPMAD NGYDISDYFD INEEFGNMED FDLLVEEAKK RDIKVMMDLV LNHTSNEHEW FKEAISDKDS PYRNYYIIRE GKEPPNNWRS IFGGSTWTKI DGEDAYYLHS FAKEQPDLNW ENPKLREEVI NIVNFWIDKG ITAFRMDAIN HIKKDPSYKS GDPDGADGRV SVVKFGRNQD GVEELIRILS DNTFKIHDSM TVGETAGLSY DKYANYIGDD GVFSMVFDFI PANFDVVEET WYKRLDWKVS DFRKSIFDSQ ESIQKYGWSA NFIENHDQPR ATTKILREKD EDIDAIKMLG GIYFFFRGTP YIYQGQELGM KNFVRESPDD FQDIQSIDSY KRSLEEGFSE KEALYFTNLR SRDNPRVPFA WTNEKYGGFS ETKPWLAMAY DNPKVNAEDE EKDKDSVLNF YKKMIDFRQN SQYSDILIYG DFKPLEGFDD EIIAYERILD GKKLEIIANF SDEEKKIEAR GKDIIFSNSK GEIEGDILSL NPYSFVILKN KNNK
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