Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1592 |
Symbol | |
ID | 8398404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1731491 |
End bp | 1732885 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995956 |
Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
Protein accession | YP_003153334 |
Protein GI | 257067078 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00442608 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAA ATGTAAAGCC TTTTGGCTTA AAAGATAAGA TTGGTTATGC AGCAGGAGAT GTTGCAAACA ACTTCACCTT TACCCTTGTT AGTAGTTTTC TGATGATATT TTATACTAAC GTATGGGGGA TAGATCCAAA ACTTGTTGGA GGATTATTCT TTCTTTCGAG AATAATTGAT GCCTTTACTG ATGTAGGAAT GGGAACTATC GTAGATAAGT TTACAGGAAA TAAGGACGGA AAGTTTAGAC CATTTATCAA ATGGGGAGCG ATACCAGTAG CTATAGCAGG ATTCTTGCTC TTCCAATCAG GACTTAAAGA TTTACCAATG GGAACAAAAA TAGTGATAAT GTATGCAACC TACATCCTTT GGGGATCACT TTGCTACACC TTCATTAACA TCCCATATGG ATCAATGGCT TCAGCAATAA CATCTGATGC AGATCAAAGA ACAGAGCTTT CAACATTTAG AACTCTAGGA GCAACAGTAG CAGGTCTTAT AATTGGATTT GTTACTCCAT ATCTAATTTA TCAGAAAGTT CCTGGTCAAG CTGATATCCT ATTAGAAAAT AGATTTCCGC TTGTAGCTGG AATCTACGGA ATACTAGCTA TTATTTCTTA CTTTATTTGT TACTCCTTCT GTACTGAAAG AGTTGACATA GAAAGAGAAT CAGCTGGTCC AAAAGAAAAC GCCCTTAAGG GAATCGGAAA TGTAATTAGT AAAAGATCTC TACTATCAAT CATAGTAGTA TCTATATGCC TCCTTCTTGG AATGCTTTTA GTTGGTTCAA TGAATATATA TGTATATTCT ACCTACTTCC AAGATACAAC TGGAATGGCT CTAGCTGGTC TTTGTGGTAC AGTTCCAATG CTATTTACAG CTCCAATGGC TATGAAACTT GGACAAAATA TTGGTAAGAA AGAAGCATCA TCTATTGGAC TTATAGGTGC AGGTGTAACT TACTTTATAC TTTTCATCTT GAAACTTGAA AATATGTACC TATTCCTAGC TGGAACTGTT ATAGCTTATA TATTCCTAGG AATATTTAAC ACCCTAACTT GGGCCATGAT TACAGACGTA ATCGATGACT TGGAAATCAA AAATGGAGTA AGAGATGACG GAAAAGTTTA TGCTATTTAC TCATTTGCAA GAAAGTTAGG CCAAGCCTTT GCTGGAGGAC TTGGTGGATT TGCAGTAGCT TCAGTAGGAT ATGTTGCAGG AGCTGCGAGT CAAACAGCAG AGGTTGCTCA GGGAATATAT AATGTAGCGA CGCTAATACC AGCTATAGCC CTAGGACTTG GTGGCTTAGT AGTCTTTTTA ATATATCCAC TCAATAGAAA AACTGTAGAG AAAAATAATA AGACTCTTGC AGAAAAAAGA GCTCAATTAA AATAA
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Protein sequence | MQKNVKPFGL KDKIGYAAGD VANNFTFTLV SSFLMIFYTN VWGIDPKLVG GLFFLSRIID AFTDVGMGTI VDKFTGNKDG KFRPFIKWGA IPVAIAGFLL FQSGLKDLPM GTKIVIMYAT YILWGSLCYT FINIPYGSMA SAITSDADQR TELSTFRTLG ATVAGLIIGF VTPYLIYQKV PGQADILLEN RFPLVAGIYG ILAIISYFIC YSFCTERVDI ERESAGPKEN ALKGIGNVIS KRSLLSIIVV SICLLLGMLL VGSMNIYVYS TYFQDTTGMA LAGLCGTVPM LFTAPMAMKL GQNIGKKEAS SIGLIGAGVT YFILFILKLE NMYLFLAGTV IAYIFLGIFN TLTWAMITDV IDDLEIKNGV RDDGKVYAIY SFARKLGQAF AGGLGGFAVA SVGYVAGAAS QTAEVAQGIY NVATLIPAIA LGLGGLVVFL IYPLNRKTVE KNNKTLAEKR AQLK
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