Gene Apre_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1586 
Symbol 
ID8398398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1722762 
End bp1723094 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content33% 
IMG OID644995950 
Productphosphotransferase system PTS lactose/cellobiose- specific IIA subunit 
Protein accessionYP_003153328 
Protein GI257067072 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATG AAAAAATGTA TGAAGTAGCC TTTCAAATAA TAGTTCACGC AGGAGAATCC 
AGATCGCTAT CAAGTGAAGC CATGGATGCT TGTGAAAACT ATGATTTTGA AAAGGCTGAA
GAATTGTTGA AGAAGGCAAA TGAAGAATTT CTAGAATGCC ATCAAATACA AACAGACCTT
TTGACAGCAG AAGCAAACGG TGAGAAGAAT GAAATAAATA TAATATTCAT CCACTCACAA
GATCACCTAA CAATGGCTAC AATGGCTATG GAAAATGCTA GAAGAATGAT AAAGATGTAT
AAAAAATTAG AAAAATTGGA GGAAAAGAAA TGA
 
Protein sequence
MDNEKMYEVA FQIIVHAGES RSLSSEAMDA CENYDFEKAE ELLKKANEEF LECHQIQTDL 
LTAEANGEKN EINIIFIHSQ DHLTMATMAM ENARRMIKMY KKLEKLEEKK