Gene Apre_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1568 
Symbol 
ID8398380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1692340 
End bp1693056 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content37% 
IMG OID644995932 
Productribosomal protein S3 
Protein accessionYP_003153310 
Protein GI257067054 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01008] ribosomal protein S3, eukaryotic/archaeal type
[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000461215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCAAA AAGTAAACCC AAAAGGATTT AGAGTAGGTG TTATCAAGGA CTGGGATTCA 
AAATGGTTCG CAGACAAGAA AGATTTCTCA GATCTATTAG TTGAAGATTA TAACATCAGA
AAAATAGTTA AAAAAGAAGT ATACGATGCA GGTATTTCTG ATATAGAAAT AGAAAGAGCA
GTAAACAACC TTAAGATTAC AGTATTTGCT GGAAAACCAG GAATGGTAAT CGGAAAAGGT
GGATCTGGAG TTGAAGAACT TAAGAAAAAA CTTGAAAAAG TTGCTCCAGG TAGAAGAATC
ATCATCAATG TTGAAGAGAT CAAATACCAA GATCTTTCTG CTCAACTTGT AGCTGAAAAT
ATTGCAAACC AACTAGAAAA CAGAGTTGCT TTCAGACGTG CTATGAAACA ATCTATGCAA
AGAACAATGA GAGCAGGAGC TAAGGGTATC AAGACAATGG TATCTGGTAG ACTTGGTGGA
GCTGATATGG CTAGAAGCGA AGGATATTCA GAAGGAACAA TCCCACTTCA AACACTAAGA
GCAAACATTG ACTACGGATT TGCTGAAGCT GATACAGAAT ACGGTAAGAT TGGTTGTAAA
GTATGGATCT ACAAGGGCGA AGTTCTTCCA GGAGAAAAGG CTCAAAGAGA ACCAAAGATG
AAACAACCAA GAAACAACAG AAGAAGAAGA AATAATAGAC GTCCAAATAA TAAATAA
 
Protein sequence
MGQKVNPKGF RVGVIKDWDS KWFADKKDFS DLLVEDYNIR KIVKKEVYDA GISDIEIERA 
VNNLKITVFA GKPGMVIGKG GSGVEELKKK LEKVAPGRRI IINVEEIKYQ DLSAQLVAEN
IANQLENRVA FRRAMKQSMQ RTMRAGAKGI KTMVSGRLGG ADMARSEGYS EGTIPLQTLR
ANIDYGFAEA DTEYGKIGCK VWIYKGEVLP GEKAQREPKM KQPRNNRRRR NNRRPNNK