Gene Apre_1567 details

Gene Information

• Locus tag: Apre_1567
• Symbol: rplP
• ID: 8398379
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: -
• Start bp: 1691875
• End bp: 1692303
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644995931
• Product: 50S ribosomal protein L16
• Protein accession: YP_003153309
• Protein GI: 257067053
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00199901
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATGC CTAAAAGAGT TAAATATCGT AGACAACATA GAGGCAGAAT GAAAGGTTAC 
GCTCACAAGG GTAATGAACT TACTTATGGT GAATACGGTC TTCAAGCAGT AGAATCTACT 
TGGATGACAG CTAACCAAAT CGAGGCTGCT CGTCGTGCGA TGACAAGATA TATCAAAAGA 
GGCGGAAATA TTTGGATCAA AGTATTTCCA GACAAGCCAG TTTCTAAGAA ACCAGCAGAA 
GTAAGAATGG GATCTGGTAA AGGTGCTCCA GAATATTGGG TTGCTGTAGT AAAACCAGGT 
AGAGTATTAT TTGAGATGAG TGGTGTTAGT GAAGAGGTTG CTAGAGAAGC TATGAGACTT 
GCAGCGCAAA AACTTCCAAT CAAGACAAAA TTCATCCAAA GACTTGAAGT TACAGGTACG 
GAGGAATAA 

 

Protein sequence

MLMPKRVKYR RQHRGRMKGY AHKGNELTYG EYGLQAVEST WMTANQIEAA RRAMTRYIKR 
GGNIWIKVFP DKPVSKKPAE VRMGSGKGAP EYWVAVVKPG RVLFEMSGVS EEVAREAMRL 
AAQKLPIKTK FIQRLEVTGT EE