Gene Apre_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1557 
Symbol 
ID8398369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1688072 
End bp1688581 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content38% 
IMG OID644995921 
Productribosomal protein S5 
Protein accessionYP_003153299 
Protein GI257067043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000355903 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT TATTAAGAAG TGAAGTAGAA AAGCTAAACC TCGAAGACAG AGTAGTTGCT 
ATAAACAGAG TTGCAAAAAC TGTAAAGGGT GGACGTAACA TTAGATTTTC AGCCCTAGTA
GTTGTTGGAA ATGGTAATGG TTATGTTGGA ATCGGAACTG GTAAGGCTAC AGAAGTACCT
GAAGCTATTA GAAAAGCTAG TGAAGATGCT AAAAAGCACA TGATTAATGT TCCAATAGTA
GGAACTACAA TTCCTCACAG AATTCACGGA GCAAAAGCAA GCGGAAAGGT TCTACTAATG
CCTGCTAAAG AAGGTACAGG AATCATCGCT GGTGGCCCTG TTCGTGCTAT CTGTGAACTT
GCTGGATATA AAGATATCAG AGCTAAAAAC TTAGGTTCAT CAAACCCAAG AAACATTATC
AATGCTTGTA TCGAAGGTTT CGCTAGCATG AAGACTGTTG AAGAAGTTGC AAGACTTCGT
GGCAAATCGG TAGAAGAATT CGATTATTAA
 
Protein sequence
MNYLLRSEVE KLNLEDRVVA INRVAKTVKG GRNIRFSALV VVGNGNGYVG IGTGKATEVP 
EAIRKASEDA KKHMINVPIV GTTIPHRIHG AKASGKVLLM PAKEGTGIIA GGPVRAICEL
AGYKDIRAKN LGSSNPRNII NACIEGFASM KTVEEVARLR GKSVEEFDY