| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1554 |
|---|
| Symbol | |
|---|
| ID | 8398366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1686096 |
|---|
| End bp | 1687370 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644995918 |
|---|
| Product | preprotein translocase, SecY subunit |
|---|
| Protein accession | YP_003153296 |
|---|
| Protein GI | 257067040 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0492066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGATA TAATTAAAAA AGCAGCAAAG GAAGAAGAAA TAAGAAAAAG ATTTTATTTC
ACTCTTCTAA TGCTAGTAGT ATATAGACTA GGAAATAATA TTCCAATACC ATTTATTGAT
ACAAAAGCGC TAGCAGATGC ATACAACAAT ATCCAAGGAA CACTTGTAGA TTACCTAAAC
ATGTTGACAG GTGGTGGACT TTCCACACTT TCAATATTTG CTCTAGGAGT ACAACCTTAC
ATCACCGCAT CAATCGTAAT GCAGCTACTT TCAGTTGTAA TACCAAGACT TGAAGAGTTA
TCAAGAGAAG GTGAGCAAGG AAGAAAAACA ATCCAAAAAT ATACAAGGTA CGTTACAATT
GCTCTAGCGA TATTCCAAGC TATAGCCATA ACAAATGGTC TATACGGAGC AGCACTTTCA
AGCGCAACAG GTTTCCAAAA AGTTGTGATG AACATAGTCC TAATCGGTGG TACTATGTTT
GTAACATGGA TGGGTGAGAC CATAACAGAA AAGGGACTTG GAAATGGTAC AAGTCTTATC
ATCTTTATGG GTATTATAGC ATCCTTCCCA AGAACCATAG CTAGATGGAA ACAAGGACTA
CACTATGATA CAACTAGCAT AGTATCCATC ATAATCATGG CTATTATCGT TGTACTGATA
GTTCTTGCAG TAGTTGAAAT ATCTGAGGGT GAAAGAAAAG TACCAATCCA ATACGCCAAA
AGAGTAGTAG GACGTAAGAT GTATGGTGGT CAATCAACCC ACATTCCTGT TAAGGTAAAC
ATGGGTGGAG TAATGCCAAT CATCTTCGCA TCAGCAGTAC TTGCCATTCC ATCAACCCTA
TCATTATTAT TTGGTGGAAA TGGACAAAAC TCAGTTGCGA ACTTCTTCCA AAACTCAGTA
CTTGGATTTG CGGTATATCT TCTAATCCAA ACTATACTAA TCCTAGTATT CGCATACTTC
TACAATCAAA TCCAATTTAA CACTGTGGAA TATGCAAAAC AACTACAACA AAACGGTGGT
TTCATACCTG GAATTAGACC TGGTAAGCCA ACTAGTGATT TCCTAGCAAA TGTATCAACA
AGAATTACAT TTATAGGATC AATCGCCCTA GCCTTACTAA CAATAGTTCC AGCAATTGCA
TCAAGAGTTT TAGGTCTACA AATATCCTTC GGTGGTTCTT CAGTAATCAT CGTAGTTGGT
GTAATCATAG AAACTGTTAA ACAAATCGAA GCAATGATGA CAATGAAACA ATACAAAGGC
TTTTTAAACA GGTAA
|
|---|
| Protein sequence | MLDIIKKAAK EEEIRKRFYF TLLMLVVYRL GNNIPIPFID TKALADAYNN IQGTLVDYLN
MLTGGGLSTL SIFALGVQPY ITASIVMQLL SVVIPRLEEL SREGEQGRKT IQKYTRYVTI
ALAIFQAIAI TNGLYGAALS SATGFQKVVM NIVLIGGTMF VTWMGETITE KGLGNGTSLI
IFMGIIASFP RTIARWKQGL HYDTTSIVSI IIMAIIVVLI VLAVVEISEG ERKVPIQYAK
RVVGRKMYGG QSTHIPVKVN MGGVMPIIFA SAVLAIPSTL SLLFGGNGQN SVANFFQNSV
LGFAVYLLIQ TILILVFAYF YNQIQFNTVE YAKQLQQNGG FIPGIRPGKP TSDFLANVST
RITFIGSIAL ALLTIVPAIA SRVLGLQISF GGSSVIIVVG VIIETVKQIE AMMTMKQYKG
FLNR
|
|---|
| |