Gene Apre_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1548 
Symbol 
ID8398360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1683510 
End bp1684103 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content37% 
IMG OID644995912 
Productribosomal protein S4 
Protein accessionYP_003153290 
Protein GI257067034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAT CAAAAGATCC AGTATACAAA AAAGCAAGAG CTTTAGGAAT TTCTCCAGCA 
TACCTAGGAT ATACAGGAGA AAGCAAAAGA GCTCTTCCAA ATAGAAGAAG CAAACTTTCC
GAATACGGAA TGCAACAAAG AGAAAAGCAA AAAGCTAAAT TCATCTATGG AGTTAGTGAG
AAACAATTTA GAGGATACTA CGAAGCCGCT TCTAAAATGA AGGGACAAAC AGGTGAACAA
CTTATAATCC TTTGCGAAAG AAGACTAGAC AATATCGCAT TTAGATCTGG TCTTGCTAGA
ACTAGAAGAG AAGCTCGTCA AATCGTAACA CACGGACACC TAACAGTTAA TGGTAAACAA
GTTGACATTC CTTCATACAA GGTATCTGAA GGCGATGTAA TCGAAGTTCG TGAAAAATCT
AGATCAAACA CACTATTTAA AACTATCAAA GAAACAAATG CAACATTTGG AGTAGTTGAA
TGGTTATCAA GTGATTTAGA AAACCTAAAA GTAACTGTAG ACAGATTCCC TACAAGAGAA
GATATCGACA TCCCAGTTGA AGAACGTATG ATCGTAGAGT TCTACTCTAA GTAG
 
Protein sequence
MAVSKDPVYK KARALGISPA YLGYTGESKR ALPNRRSKLS EYGMQQREKQ KAKFIYGVSE 
KQFRGYYEAA SKMKGQTGEQ LIILCERRLD NIAFRSGLAR TRREARQIVT HGHLTVNGKQ
VDIPSYKVSE GDVIEVREKS RSNTLFKTIK ETNATFGVVE WLSSDLENLK VTVDRFPTRE
DIDIPVEERM IVEFYSK