| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1547 |
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| Symbol | |
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| ID | 8398359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1682522 |
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| End bp | 1683478 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644995911 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003153289 |
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| Protein GI | 257067033 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGAAA AATTAGATAC AAATATACAG ATATTGGATA TAGACGAAGA AGAAAATTAC
GGTAAATTCG CCCTATATCC ACTTGAGCGA GGATATGGTA CAACCATTGG AAACAGTATG
AGAAGGGTGC TTTTATCATC CTTACCTGGT TCTAGCGTCT CAAAAATACT TATAGAAGGA
GTGCTTCACG AATTCTCCAC TATAGATGGA GTAGTAGAAG ATGTTCCTGA AATAGTTCTA
AACATTAAGG GTCTAGACGT TACAAAACAT GTAGATGAAG ATGTAACATT GTTTTTAGAC
ATTGAAGGAC CAAAGATTGT AACAGCAAAA GATATCAAAG CAGATAGTTC CGTAGATATA
GCAAATCCTG ACCACTACAT CGCAACAGTT AACGAGAAGT CAAGACTATT TATAGCGATG
GATGTTACAG ATGGTAAGGG TTATAGGGTA TCTGATGATA ACAAGAAAGA AAGCGACCCA
ATCGGTGCAA TCGCAATTGA TTCATCATTT ACTCCAGTTG AGAAAGTAAA CTTTACTGTA
GAAAATACAA GAGTAGGCGA ATCAACCGAC TATGACAAAC TCGTTATGGA AGTTTGGACA
AATGGAACTA TTACACCACA AGAAGCCCTT GCAGAAGGAT CATCAATCTT AATAGAAAAC
TTCTCTTTCT TCAACGAATT GCCTAACCAA CAATTCCCAC CTGAAGTGGA AGAAGAAGAA
ATAGAAGAAG TAGAAGAAGA AGATAGTCTT TCAGAAGATT TGGCAATGAC AATAGAAGAA
TTAGACCTAA GTCTAAGATC ATTTAATTGT CTAAAAAGAG CAGGCTTCGA CAGAGTTGGC
GATATAATCA AGGTTAGCGA ATCTGAGCTA AAAACAATCA AGAACTTCGG TAAAAAGTCA
CTCACAGAAG TAATAGAAAA GCTAGACGAG TTAGGTCTAA GCTTAAAAGA TGAATAG
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| Protein sequence | MIEKLDTNIQ ILDIDEEENY GKFALYPLER GYGTTIGNSM RRVLLSSLPG SSVSKILIEG
VLHEFSTIDG VVEDVPEIVL NIKGLDVTKH VDEDVTLFLD IEGPKIVTAK DIKADSSVDI
ANPDHYIATV NEKSRLFIAM DVTDGKGYRV SDDNKKESDP IGAIAIDSSF TPVEKVNFTV
ENTRVGESTD YDKLVMEVWT NGTITPQEAL AEGSSILIEN FSFFNELPNQ QFPPEVEEEE
IEEVEEEDSL SEDLAMTIEE LDLSLRSFNC LKRAGFDRVG DIIKVSESEL KTIKNFGKKS
LTEVIEKLDE LGLSLKDE
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