Gene Apre_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1543 
Symbol 
ID8398355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1678535 
End bp1680490 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content31% 
IMG OID644995907 
Productbeta-lactamase 
Protein accessionYP_003153285 
Protein GI257067029 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAATATTGCT TATAGCAGCC TTTACCTTCT TAATCCCATT TAATGCAAAT 
GCCGATAGTA AAAAATATAG CAGTGATGAT GTAATTGAAT ATGATTATAG TTTTCCAACA
AGCATTGAAG AATATGATGA TTCTATTTTG ACTAACTCAT CTCATAAATT TTATTACGAT
GATAATATTT CAGATCAGAT TACTGTTAGT GACTATGATA AGGCAGATGT TTTTGTAAAT
GGTAAGGCTG TAGAGTCTGA TGATGAGGCT AGAAAGCTTA TTCAAGAAGG AAAAAATTCT
GTAGATATTT TAAATGTTAA AGAAAAAGTC GATGTAAAGA TTAAATCTGG AAAGGAAGAA
AAAGGATTTA CTAACATCGA TAACAAATTG GATGAAAAAG TAACTAATTT GATGGAAACA
CTACTTGAAG AAGAAGTAAA GGAGAATTTT TCTGGAGGCC AGATTAGTGT AATTAGAGAC
AATGAAGATA TATATGACTA TCAATTTGGT TATGTAAATA ATTTCGAAAA AAATGGAGAA
TCTATTCCTT TTGAGGATAG GGTTAAAGTC GATGAGAATA CATTATTTGA TCTTGCAAGC
AATACAAAAA TGTATGCGAC AAATTATAGC TTACAAAAGT TGGTTTATGA AGGAAAAATC
AATATTGATG ATAAAGTGTC TAAGTATTTT CCAGAATTTA AGGATGACGA AAAAAGTCCT
ATAAAGGGTA AAAATGAAAT GACTATTAGG GATATACTCA GACATCAAGC TGGATTTCCT
GCTGATCCTC AATACCACAA TAACAATTAC GACAAAGATG ATGGCAATAT CAATGGAGTT
AATGATTTGT TTTCACAACA TAGGGAAAAA ACATTGGATA TGGTAATGAG AACACCTCTT
TCATACGAGC CTGGATCAAA ATCAGTATAT TCAGATGTAG ATTATATGCT TCTTGGATTT
ATAGTAGAAA AAGTTACGGG ACAAAGATTG GATAAATACT TTGATGAAAA CTTTGCTAAG
CCATTAAATC TTAGATATAC AACATTTAAT CCTTTAGAAA ATGGTTTTGA TAAAAATCAG
ATAGCTGCTA CCGAACTAAA TGGTAATACA AGAGATGGTG CAGTTGATTT CAAAAATATC
AGAAAGGATA CCATCCAAGG TGAGGTTCAT GATGAGAAAG CTTATTATGC TATGGGTGGA
GTAAGTGGTC ATGCAGGATT GTTTTCAAAT TCACGAGAAT TAGCAAAACT TGCAAATATT
ATGCTAAATG AAGGTAGATA TAAAAATATT AGATTTTGGG ATAAAAAAAC TCAAGATGAA
TTTATAAAAG CAAGTGAAGT TAATCCATCT TACGGATTAG GTTGGAGAAG AATGGCTGAT
GGTAGATATG CTTGGGCATT TTCTAACCTA GCAAGTTCGA ATACAATTGG CCATACCGGC
TGGACAGGCA GCCTTACAGT TATCGATCCA TTGGAGAGAA TGACCTTCGT CTTATTAACA
AATAAAAAGA ATGGTTATGT ATTAGATAAT AAAGAAAATC CTAATTATTT TTATGCTGAC
GCTTCTAAGA GTGGAGGTTA TGGTGCGGTT AGTACTTTAA TTTATAAATC TCTTCAAGAT
AATTCAAAAG AGCTAGTTAT GGCTCTAGCA AATGAATTGG CGATTGGACA AGAAAGGATG
CTAAAAGATA AGGAAGGCTT TCTTGATGAA GCTCGACTTA ATGATTATAT AGCTATAAAA
AATACAAATC AGATTATTAA AGATAAGTAC CAAAATACAA GCGAAGAAGC TAGTAGTATT
GATGATAAAA AATATGATTA TGATACTTTA GAAAATACTA GCAAGGAAGC AAAGCTTGTT
GAAAGCTTTA ATCCTAAAAC AGGTGTAGAT GGATTAATAC CCTTAATTGG ACTCGCACTT
TCTTCAGCTT TTGCCTATAG GAAAATAAAG AGATAA
 
Protein sequence
MNKKILLIAA FTFLIPFNAN ADSKKYSSDD VIEYDYSFPT SIEEYDDSIL TNSSHKFYYD 
DNISDQITVS DYDKADVFVN GKAVESDDEA RKLIQEGKNS VDILNVKEKV DVKIKSGKEE
KGFTNIDNKL DEKVTNLMET LLEEEVKENF SGGQISVIRD NEDIYDYQFG YVNNFEKNGE
SIPFEDRVKV DENTLFDLAS NTKMYATNYS LQKLVYEGKI NIDDKVSKYF PEFKDDEKSP
IKGKNEMTIR DILRHQAGFP ADPQYHNNNY DKDDGNINGV NDLFSQHREK TLDMVMRTPL
SYEPGSKSVY SDVDYMLLGF IVEKVTGQRL DKYFDENFAK PLNLRYTTFN PLENGFDKNQ
IAATELNGNT RDGAVDFKNI RKDTIQGEVH DEKAYYAMGG VSGHAGLFSN SRELAKLANI
MLNEGRYKNI RFWDKKTQDE FIKASEVNPS YGLGWRRMAD GRYAWAFSNL ASSNTIGHTG
WTGSLTVIDP LERMTFVLLT NKKNGYVLDN KENPNYFYAD ASKSGGYGAV STLIYKSLQD
NSKELVMALA NELAIGQERM LKDKEGFLDE ARLNDYIAIK NTNQIIKDKY QNTSEEASSI
DDKKYDYDTL ENTSKEAKLV ESFNPKTGVD GLIPLIGLAL SSAFAYRKIK R