Gene Apre_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1542 
Symbol 
ID8398354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1677543 
End bp1678532 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content34% 
IMG OID644995906 
Productprotein of unknown function DUF871 
Protein accessionYP_003153284 
Protein GI257067028 
COG category[S] Function unknown 
COG ID[COG3589] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGTT TTTCTTTATA TTTTGATAGG GACTTTGATT TAGAAAAAGA AGTAAATAAG 
TATGAGGGTT TTGATATTTT ATTTACTTCG ATTCATTATC CAGAAGGAGA GAATACTTTC
GAAAAGTTCT TGAATCTTTG CGAAAAATCC ATTGGAAGAG ACTTTAGGAT TTGCGTCGAT
CTAAATAAGG ATGTCCTTAG TAGGTATCCA AAACTTATGG ATATGGACCT TATACTGAGG
CTTGATTATG GTTTTAATAG CAAAGAGATA GCCGAATTAA GTAAGAATAA TAGGATTTCT
ATAAACGCTT CTACTATAGA TAGGAAAATC CTAAATGAAA TTTTATCCTT CGGTGCGAAT
AAGGATAATA TCCTTGCCAT ACACAACTAC TATCCTCTTG AATTTACAGG TCTAGGAGAA
GATTATCTTA GGAGGAGAAA TGATCTATTT AAGTCATTAG GAATAGAGAC TCTTGCCTTT
GTGCCAGGCA ATGAGAACTT GCGTGGCCCA ATGTATAGGA GTCTACCAAC CCTTGAAAGT
CAAAGACTGA AGGATCCCTA CCTAAGTTTT GTGGAACTTA ATAGAAAATA CGGGATGGAT
TCTATAATAA TGGCTGAAGG GGTTGATGAT AAGAATATTT CTAACATTAG AGATTTTCAT
AAAGATAATA AGTTAAGCCT TAAAGTTAAT ATGAATGATG AATTTAATTA TATCAAAGGC
TTTAAACAAA GGATGGATCT TAGCGAATAT ATCCTAAGAA ATGAGAGGAA ATATAGGAAG
GTAGAAGCGG GTTCTTCCTT CTATGCTAAA AGAGGAGATA TACTAATCCT AAACGAGAAG
GCTGGAAGAT ACAGCGGGGA GATTGAAATC TGTAATAGAG ATTTAGGTAT CATATCAGAT
AGAAATCTTA TAGGAAAAGT GGATACTACA CACATTGAAC TAATTGATTA TATAAAAGGA
GGTGATGAGA TTGTCTTCAA CAGAAGATAG
 
Protein sequence
MLGFSLYFDR DFDLEKEVNK YEGFDILFTS IHYPEGENTF EKFLNLCEKS IGRDFRICVD 
LNKDVLSRYP KLMDMDLILR LDYGFNSKEI AELSKNNRIS INASTIDRKI LNEILSFGAN
KDNILAIHNY YPLEFTGLGE DYLRRRNDLF KSLGIETLAF VPGNENLRGP MYRSLPTLES
QRLKDPYLSF VELNRKYGMD SIIMAEGVDD KNISNIRDFH KDNKLSLKVN MNDEFNYIKG
FKQRMDLSEY ILRNERKYRK VEAGSSFYAK RGDILILNEK AGRYSGEIEI CNRDLGIISD
RNLIGKVDTT HIELIDYIKG GDEIVFNRR