Gene Apre_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1538 
Symbol 
ID8398350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1673388 
End bp1674026 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID644995902 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003153280 
Protein GI257067024 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.539113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TAAATTCATA TATAGACCAC ACTAATTTAA AGCCAGAAGC ACAAATTTCC 
GAGATAAAAA CCCTTGTCGA TGAAGCTATC GCAAATGATT TCTACAGTGT ATGTGTAAAC 
TCTACCTACG TTAAGGATAT CAAAGCCTAC AATAAAGACG TAAGAATCGC TGCAGTAGTT 
GGCTTTCCAC TAGGAGCAAT GGCTACAAGG GCCAAGGCCT ATGAGGCAAA ATGCGCCGTA 
GAAGACGGGG CAAGCGAGAT CGATATGGTA ATTCCAATCG GAAGACTTAA GGATAAAGAT 
TATGCCTATG TCCTAGATGA TATAAGAGCT TGTAAGGAAG CTATAGGAGA TAGAATCCTT 
AAGGTAATCA TTGAAACTTG CCTATTAACA GACGAGGAAA AGATTAAGGC CTGTGAGCTA 
GCTGAGGAAG CTGGAGCTGA TTTTGTAAAG ACTTCTACAG GATTTTCTAC GGGAGGAGCT 
TTAGTCTCTG ACGTAAAACT TATGAAGGAA ACAGTAGGAG ATAGGCTAGA AGTTAAGGCA 
AGTGGCGGAA TCCATACTAG AAAAGAAGCC ATGGATATGA TTGAAGCTGG AGCTAGTAGG 
ATTGGTGCTA GTAAGTCAAT TGATATTTGT AAGGAGTAA
 
Protein sequence
MKKLNSYIDH TNLKPEAQIS EIKTLVDEAI ANDFYSVCVN STYVKDIKAY NKDVRIAAVV 
GFPLGAMATR AKAYEAKCAV EDGASEIDMV IPIGRLKDKD YAYVLDDIRA CKEAIGDRIL 
KVIIETCLLT DEEKIKACEL AEEAGADFVK TSTGFSTGGA LVSDVKLMKE TVGDRLEVKA 
SGGIHTRKEA MDMIEAGASR IGASKSIDIC KE