| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1532 |
|---|
| Symbol | |
|---|
| ID | 8398344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 1667173 |
|---|
| End bp | 1668738 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644995896 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003153274 |
|---|
| Protein GI | 257067018 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000742364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TAGTAAAGAT TATCCTTGCA CTTATCCTAA TCATTACGCC CCTTGGCCAG
GTTAATGCAA GCGAAGAAGA CACATTCAGA GTGGGTATGG AAGTAAACTA CGCTCCCTTT
AACTTCTCTG AAGTAAGTGA TGAAAATGGA GGCTATCCTG TAGCCAACTC CCCGGGCGAA
TATGCCAACG GTTATGACGT CCAATTTGCC AAGAAGATCG CCGATGGTCT AGGCAAGAAG
CTTGAAATCT ACAAGATCGA ATGGGACGGA CTAATTCCTG CCCTAACTAG TGGCAAGATC
GATGCAATAG TAGCTGGTAT GAGCCCAACC GCTGAAAGGC TAGAGCAAAT CGACTTTTCT
GTTCCCTACT ACCATGCCAA GATGGTTGTA GTTACCCAAA AGGACTCAAA GTATGAGGAT
GCTAAGTCCA TTAACGACTT CGAAGGAGCA AAGATTACCG CCCAACTAGG GACCTTCCAT
GTAGCTATGA TAGATCAAAT GGCAGGTGTT AACAAACAAG AGTCCATGGA CTCCTTCCCT
ACAATGATTG CTGCTGCAAA TGCTGGGACT ATTGATGGAT ATATCTCAGA GGAGGCTGGA
GCTGAATCTG CTGTGGCTGC CAACCCAAAG CTTACTTATG TAACTTTTGA TGAAGCTAAT
GGCTTTGAGA CTAAGGATGA AGATACAACA GTAGGAGTAG GGATTGCCAA AAATTCTCCT
CTTACAGAAG AAGTGAACAA GGTTCTTTCA TCTATGGATA TAGAAAAGGA ACAAGAAGAG
ATTATGGGAG TAATGACCAA GCTTACTGCA GATGAGGAAG AAAGCGCAGG CTTTATCGAT
GAAGTTAAAT CGATTTGGGC GACCTACTCT ACTCTTTTCC TAAAGGGTGT AGTTAATACC
CTAATCATAG CCATAGTTTC TACAATCCTA GGTTTCCTCT TAGGCCTTTT GGTTGCAGTT
ATTAGGGGAA TGGAAGTCAA AAAGACAGAT AATGCCTTTA CCTACTATCT CCACAAAATA
ATCAACTGGA TCTTGGGAGC TTATGTTGAA ATATTTAGGG GAACCCCAAT GATGGTTCAA
TCTGTAATCA TCTTCTACGG ACTTAAGCAA TATTTCGATA TAGACCTATC GACTATGTTT
GCAGCAATCC TTATCGTTTC AATCAACACA GGAGCCTACC TATCTGAGGT AGTCCGTGGA
GGAATCAATT CGATTGACAA GGGACAATTT GAAGCCTGCA AGGCTATAGG CATGACCCAT
TTCCAAACTA TGGTTCACGT AATCCTACCT CAAACAATCC TTACAATTCT TCCTTCTATT
GGAAACGAGT TTGTAATAAA TATCAAGGAT ACATCAGTCC TTAACGTAAT TTCTGTAACA
GAGCTATTCT TTATGAGTAA GTCTGTCGCA GGATCAACCT ACCAATACTT CCCAACCTAC
TTGATAACAG CAGTGATTTA TTTCGTCCTA ACCTTCACTA TTACGAGAAT CCTTCTTGTC
CTTGAAAGAA GATTTAGGGA TACTGACTTT ATCATGGAAT CATCAACAGG AGCAAACAAT
GTCTGA
|
|---|
| Protein sequence | MKKLVKIILA LILIITPLGQ VNASEEDTFR VGMEVNYAPF NFSEVSDENG GYPVANSPGE
YANGYDVQFA KKIADGLGKK LEIYKIEWDG LIPALTSGKI DAIVAGMSPT AERLEQIDFS
VPYYHAKMVV VTQKDSKYED AKSINDFEGA KITAQLGTFH VAMIDQMAGV NKQESMDSFP
TMIAAANAGT IDGYISEEAG AESAVAANPK LTYVTFDEAN GFETKDEDTT VGVGIAKNSP
LTEEVNKVLS SMDIEKEQEE IMGVMTKLTA DEEESAGFID EVKSIWATYS TLFLKGVVNT
LIIAIVSTIL GFLLGLLVAV IRGMEVKKTD NAFTYYLHKI INWILGAYVE IFRGTPMMVQ
SVIIFYGLKQ YFDIDLSTMF AAILIVSINT GAYLSEVVRG GINSIDKGQF EACKAIGMTH
FQTMVHVILP QTILTILPSI GNEFVINIKD TSVLNVISVT ELFFMSKSVA GSTYQYFPTY
LITAVIYFVL TFTITRILLV LERRFRDTDF IMESSTGANN V
|
|---|
| |