| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1526 |
|---|
| Symbol | |
|---|
| ID | 8398338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1662854 |
|---|
| End bp | 1663855 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644995890 |
|---|
| Product | PfoR protein |
|---|
| Protein accession | YP_003153268 |
|---|
| Protein GI | 257067012 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3641] Predicted membrane protein, putative toxin regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.216019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TAAGAAAAAA GGGGATAAAT TTATCCTGGA GAACTTATTT TATTGATGCT
TTGGGAGCTA TGGCCTTTGG TCTTTTTGCC TCTCTTTTGG TTGGGACTAT CCTAAATAGT
CTAGGTCAAA GCTTACATAT ACCATATCTT ACAGATAGGC TATGGCCTTT GGCAAACTCT
GCTAGTGGAG CAGCTATTGC AGTTGCTATT GCCGCAAGTC TTAATGCACC CAAGCTTGTC
CTTTTTGCTT CTACTATTGT AGGACTCGGA GCCTATGAGC TGGGAGGGCC TGTGGGAGTT
TTCCTTGCCA CGATTTTTGG AGTTGAGTTT GGTAAGCTTG TCTCAAAATC TACCAAGCTT
GATATAATAA TTACTCCCAG TGTCACGATT ATAGTAGGGA TTTTGGTGGG TGATTTGATA
GGACCTTATG TAGCTAGTTT TATGAAGGCA ATAGGATTAT TTATCATGAA GGCGACCGAG
CTTAGACCAT TTTTTATGGG AATTGTAGTC GCATTTACTA TTGGTATGGC CCTTACCCTA
CCGATCTCAT CTGCGGCAAT TTGTATGATG CTTAGTCTAG AAGGCCTTGC AGGAGGAGCG
GCCACAGTCG GTTGTTGTGC CCAAATGATT GGTTTTGCTG TAATTTCCTA CAAGGATAAT
GGCTTGGAGG GACTTCTCGC CCAAGGGCTG GGGACTAGCA TGTTTCAGGT ACCAAATATA
ATCAAGAACC CTTGGATTTG GCTTCCGCCA ACCCTTGCAA GTGCCATTCT TGCTCCAATC
GGGACCCTAG TCTTTAAGAT GAAAAACACT CCTCTAGGTT CAGGAATGGG TACAAGTGGT
CTAGTAGGAC AAATCGGAAC GATTAATGCC ATGGGAATTA GTGCGATATT TAAGGTAATT
CTCCTTCACA TAATCCTTCC AGCCATCCTT TCTTATATAA TTTATAGGCT AATGAAAAAT
AAGGGGCTGA TCAAGGATGG AGATATGAAG ATTGATTTTT AA
|
|---|
| Protein sequence | MEFLRKKGIN LSWRTYFIDA LGAMAFGLFA SLLVGTILNS LGQSLHIPYL TDRLWPLANS
ASGAAIAVAI AASLNAPKLV LFASTIVGLG AYELGGPVGV FLATIFGVEF GKLVSKSTKL
DIIITPSVTI IVGILVGDLI GPYVASFMKA IGLFIMKATE LRPFFMGIVV AFTIGMALTL
PISSAAICMM LSLEGLAGGA ATVGCCAQMI GFAVISYKDN GLEGLLAQGL GTSMFQVPNI
IKNPWIWLPP TLASAILAPI GTLVFKMKNT PLGSGMGTSG LVGQIGTINA MGISAIFKVI
LLHIILPAIL SYIIYRLMKN KGLIKDGDMK IDF
|
|---|
| |