Gene Apre_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1523 
Symbol 
ID8398335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1660144 
End bp1660806 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content36% 
IMG OID644995887 
ProductABC transporter related 
Protein accessionYP_003153265 
Protein GI257067009 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.667428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA TCGAAGTTAA AAATATGAGC AAGAATTTTG AAAACAAAAG GCTCTTCAAT 
AATTTTTCCC TAGAAATTGA AGCCAACACG GTTCATGCCC TAGTCGGTCC AAATGGGTCT 
GGCAAGACAA GCCTACTTAG GATACTGACA GGTCTTTATG AAAAAGATGG TGGAGAGGTA 
AATGTTAGGG GAACTCATGC AATCTTACTA GAAAATGACT ATTTGTACGA GGATAAGACG 
GGACTTGAAA ATATTAAATT ATATGGCTTG TATTTTGGCT ATGAGGCAAA GTCTTATGAA 
AAATATTCTG ACTTGCTAGA TATTACTAAG GATCTGGATA GGAAGGTTGC TACATATTCC 
AAGGGCATGA AGAGGAAACT ATCTCTACTA ATCATTGTGA TGATGAATAG GGACATAATC 
TATCTAGATG AGGTGACAAG TGGAGTAGAT CCAATATCGA GAGTCGAGAT TAGAAAGCTT 
ATAAAATTAT TAGAGGAAGA AGCTAAGACT ATAGTTATTA CCAGCCACGA CCTTGCTGAG 
ATTGAAAAGA TTGCTGATAA GGTTTCAATG ATAAAATCAG GAGACCTACT TTTTACAAAG 
GATATGGCAG ACATAAGAGA AGAAAGCTTA GAAGATTTAT TTATAGAGGA GGGCAGGAAA 
TGA
 
Protein sequence
MKVIEVKNMS KNFENKRLFN NFSLEIEANT VHALVGPNGS GKTSLLRILT GLYEKDGGEV 
NVRGTHAILL ENDYLYEDKT GLENIKLYGL YFGYEAKSYE KYSDLLDITK DLDRKVATYS 
KGMKRKLSLL IIVMMNRDII YLDEVTSGVD PISRVEIRKL IKLLEEEAKT IVITSHDLAE 
IEKIADKVSM IKSGDLLFTK DMADIREESL EDLFIEEGRK