Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1496 |
Symbol | |
ID | 8398308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1629109 |
End bp | 1631664 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644995860 |
Product | UvrD/REP helicase |
Protein accession | YP_003153238 |
Protein GI | 257066982 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAACC TTGGTCAAGA AGAAATAATT AAAAATGCTA AGCTCCCAGC TGTGGTAATA GCAGGTCCCG GCACAGGCAA GACCCACACT ATAGTAGGCT TTGTAGCAGA AGCCATCAAG GAGGGTAAAT TTCCCGCAAA CAAAGTCCTA ATCACTACTT TCACTAAAAA GGCGGCCCGT GAGCTTAATA CGAGAATTAT TACTAGGCTT AGAAAAGATG GCCTAGATAC AGATCTTGAG GATATGAAGA TAGGTAACTT CCACTCTCTT GCCATATCCT TTATTAGCAA ATACAGGAGG CTTGACGATA ATTTCTTTAA TCTTACTATA ATCGACTCCA ACATGGAGGA ATTTATAGTA GAAGAAAATC TAGAGATTTT CACGAGCCTC CCTCACTTTG AGGACTTTAT AGTAAAAGAT TATGCTACGG CGACCATTCT TGATATCTTC CAAACCCTTA TCAATCAAAT GATAGACCCC TTATCTCTTA GGGATTCAGC TTCTCCTCAA GACAAGCTCG CCTACGAAAT ATTTACGACC TATGAAAAGC TTCTAGATTC CTTAGGCCTA ATTAATTTCC AGCTTATCTT AAAACGCTTT TTGGACTTGC TTAAAGACCC TATAATAGGG GAGAAAATAA GAGAAGAGAT AGACCTTGTT GTAATTGATG AATACCAGGA CACCAACTTA ATCCAGGAAG AAATCGCAAT CAATCTTACG AAAAATGGCA ATATCATAGT CTTTGGAGAT GACGACCAGG CCCTTTATTC CTTTAGGGGA GCCGATGCGA GAAACCTAAC CCATTTTGAT GAGAAATTCT ACCAGAGGAC TGGAATTAGG GCGAGTAAAT ACTTTCTGAA TATTAATTAT AGGTCAAATC AAGTTATAAT TGATAAGGCC AGGGCCTTTA TGGATGAGGC CAAGGGTTCT AGCAAGAAGG ACCTTAAGTC AAATAAGGCA GAGGAAAATC CCAATACCAT AGTAAGGGCT AGGGCAGATG AGATGGACAA TATCGTAATG ATAGTTAAGC TCTTATCAAA GAAAATAAAA CTCGGACAAA TTGCCTTTCT CTTTCCAAGC TTTAACAATT CATATCCTTC AATCCTCCAG AAGAAATTCG AAAATGCTGG GATTAAAGTA ATCAACAGGA AAAGCGATGG CTACTTTAGA AGAGAAGAAA TTCGCCTAAT AATTTTTGTC CTCCTTAAAA TAGCAAGGAC AGGTCCTATC AATACCGATT TTCGGGGAGG AAAGATGACC TATGGGCAAA GGCAGAAACT TGACTATAGG AACTTCCTTA AGGAAATCTA TGAAGATGAT AAGTTCAAGG AAAATAGGAA GCTTAGAAAT TTCATAGAAG ATTTTTCAGA ATCTTATTCT ATATCAGACC TTATTTACAA GCTTATGGGC CTTGAGACCT TTAAGGATAT CCTTAAGGAT AAGAATCAAG ATAAGAAGGA TCTTATTTTC AAAAATATCA GCAAATTCAT AAATCTTGCT GTAGACTATG ATGAGATTTT TGAAGAAACT AATAGTTATT ATCAGAAGTT CATCTTCTCC TATATTTTTA TTTATTTTAA GAAAAACGCC ATAGGAGAGT TCGATGAGGA TGATGTCTAC GACGATTCCA TAAACTTCAT GACCATCCAC CAGTCCAAAG GCTTGGAGTT TGAGGCAGTA TTCGTATCTA GCCTAGGAGA TTATCCGAGA AGAGATTATG ATAAGTTTAC AGATAGGTTT GTTGAAAAGG ATAGCCTAGA GAAAAAGGAA TTGGATTTCT ATAGAAAATA TTACACGGCC TTCACCAGGG CAAAAAACCT CTTGGTCCTT CTGGATAATT CGACAGATCG AAGAATAAAA AACTTCGCAT ATACCCTCGA TTCTTCATCC AAGTTAAGCT CTATTGACTT TAAGATGGAA GAGAGAAAAG ATGATAAGAA AATCCTAGCC TTTACCACAG ACATCGATGT CTATATGACC TGCCCCCTAA AGTATAAATT TGTAAGGAAA CTTTCCTTTA GGACTAAGAA GACCGAAAGC CTAATCTTTG GATCAAAGGT CCACAATCTA GCTCAATATA TCTACTCTCC TTCCTTTGAC AAGAAGGATA TGACAAGCTT CTTGTGGGAA AATAAGGGAT ACATTGAGCC AGTTTCAAAC CTACTAAACA GGGGATTTAA TGTGAAGCTA AGCGAGGCGA ACTACAAGGC GGATAGAGAT TTTTATATCC TTCAAGGAAA TATTGACCTT ATTTTAGAAG ATTCCTCAAT CATGGACCTA AAGACTGGGT CTTTTGATGA GAAAAGTCTC GCCAAATACA AAAAGCAACT TCTAACCTAT AGACAGCTCC TCCTAGCTAA TGGCAAGGAA GTAGGGAAAA TCTACCTATA TTTTATAGAA AAAGACGACC TAATCGAAGT AAAGGATGAA GGTTTTGACA TGGCTGCTAT AGATGATGTG GCTAGGGAGA TCGTTAGAGA AAACTTCAAT CATAAGACCG AAGATAGGAA AGCTTGTAAG TTCTGTCCTA TGAAGCACTT CTGCGAGCGA GCTTGA
|
Protein sequence | MRNLGQEEII KNAKLPAVVI AGPGTGKTHT IVGFVAEAIK EGKFPANKVL ITTFTKKAAR ELNTRIITRL RKDGLDTDLE DMKIGNFHSL AISFISKYRR LDDNFFNLTI IDSNMEEFIV EENLEIFTSL PHFEDFIVKD YATATILDIF QTLINQMIDP LSLRDSASPQ DKLAYEIFTT YEKLLDSLGL INFQLILKRF LDLLKDPIIG EKIREEIDLV VIDEYQDTNL IQEEIAINLT KNGNIIVFGD DDQALYSFRG ADARNLTHFD EKFYQRTGIR ASKYFLNINY RSNQVIIDKA RAFMDEAKGS SKKDLKSNKA EENPNTIVRA RADEMDNIVM IVKLLSKKIK LGQIAFLFPS FNNSYPSILQ KKFENAGIKV INRKSDGYFR REEIRLIIFV LLKIARTGPI NTDFRGGKMT YGQRQKLDYR NFLKEIYEDD KFKENRKLRN FIEDFSESYS ISDLIYKLMG LETFKDILKD KNQDKKDLIF KNISKFINLA VDYDEIFEET NSYYQKFIFS YIFIYFKKNA IGEFDEDDVY DDSINFMTIH QSKGLEFEAV FVSSLGDYPR RDYDKFTDRF VEKDSLEKKE LDFYRKYYTA FTRAKNLLVL LDNSTDRRIK NFAYTLDSSS KLSSIDFKME ERKDDKKILA FTTDIDVYMT CPLKYKFVRK LSFRTKKTES LIFGSKVHNL AQYIYSPSFD KKDMTSFLWE NKGYIEPVSN LLNRGFNVKL SEANYKADRD FYILQGNIDL ILEDSSIMDL KTGSFDEKSL AKYKKQLLTY RQLLLANGKE VGKIYLYFIE KDDLIEVKDE GFDMAAIDDV AREIVRENFN HKTEDRKACK FCPMKHFCER A
|
| |