Gene Apre_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1496 
Symbol 
ID8398308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1629109 
End bp1631664 
Gene Length2556 bp 
Protein Length851 aa 
Translation table11 
GC content38% 
IMG OID644995860 
ProductUvrD/REP helicase 
Protein accessionYP_003153238 
Protein GI257066982 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACC TTGGTCAAGA AGAAATAATT AAAAATGCTA AGCTCCCAGC TGTGGTAATA 
GCAGGTCCCG GCACAGGCAA GACCCACACT ATAGTAGGCT TTGTAGCAGA AGCCATCAAG
GAGGGTAAAT TTCCCGCAAA CAAAGTCCTA ATCACTACTT TCACTAAAAA GGCGGCCCGT
GAGCTTAATA CGAGAATTAT TACTAGGCTT AGAAAAGATG GCCTAGATAC AGATCTTGAG
GATATGAAGA TAGGTAACTT CCACTCTCTT GCCATATCCT TTATTAGCAA ATACAGGAGG
CTTGACGATA ATTTCTTTAA TCTTACTATA ATCGACTCCA ACATGGAGGA ATTTATAGTA
GAAGAAAATC TAGAGATTTT CACGAGCCTC CCTCACTTTG AGGACTTTAT AGTAAAAGAT
TATGCTACGG CGACCATTCT TGATATCTTC CAAACCCTTA TCAATCAAAT GATAGACCCC
TTATCTCTTA GGGATTCAGC TTCTCCTCAA GACAAGCTCG CCTACGAAAT ATTTACGACC
TATGAAAAGC TTCTAGATTC CTTAGGCCTA ATTAATTTCC AGCTTATCTT AAAACGCTTT
TTGGACTTGC TTAAAGACCC TATAATAGGG GAGAAAATAA GAGAAGAGAT AGACCTTGTT
GTAATTGATG AATACCAGGA CACCAACTTA ATCCAGGAAG AAATCGCAAT CAATCTTACG
AAAAATGGCA ATATCATAGT CTTTGGAGAT GACGACCAGG CCCTTTATTC CTTTAGGGGA
GCCGATGCGA GAAACCTAAC CCATTTTGAT GAGAAATTCT ACCAGAGGAC TGGAATTAGG
GCGAGTAAAT ACTTTCTGAA TATTAATTAT AGGTCAAATC AAGTTATAAT TGATAAGGCC
AGGGCCTTTA TGGATGAGGC CAAGGGTTCT AGCAAGAAGG ACCTTAAGTC AAATAAGGCA
GAGGAAAATC CCAATACCAT AGTAAGGGCT AGGGCAGATG AGATGGACAA TATCGTAATG
ATAGTTAAGC TCTTATCAAA GAAAATAAAA CTCGGACAAA TTGCCTTTCT CTTTCCAAGC
TTTAACAATT CATATCCTTC AATCCTCCAG AAGAAATTCG AAAATGCTGG GATTAAAGTA
ATCAACAGGA AAAGCGATGG CTACTTTAGA AGAGAAGAAA TTCGCCTAAT AATTTTTGTC
CTCCTTAAAA TAGCAAGGAC AGGTCCTATC AATACCGATT TTCGGGGAGG AAAGATGACC
TATGGGCAAA GGCAGAAACT TGACTATAGG AACTTCCTTA AGGAAATCTA TGAAGATGAT
AAGTTCAAGG AAAATAGGAA GCTTAGAAAT TTCATAGAAG ATTTTTCAGA ATCTTATTCT
ATATCAGACC TTATTTACAA GCTTATGGGC CTTGAGACCT TTAAGGATAT CCTTAAGGAT
AAGAATCAAG ATAAGAAGGA TCTTATTTTC AAAAATATCA GCAAATTCAT AAATCTTGCT
GTAGACTATG ATGAGATTTT TGAAGAAACT AATAGTTATT ATCAGAAGTT CATCTTCTCC
TATATTTTTA TTTATTTTAA GAAAAACGCC ATAGGAGAGT TCGATGAGGA TGATGTCTAC
GACGATTCCA TAAACTTCAT GACCATCCAC CAGTCCAAAG GCTTGGAGTT TGAGGCAGTA
TTCGTATCTA GCCTAGGAGA TTATCCGAGA AGAGATTATG ATAAGTTTAC AGATAGGTTT
GTTGAAAAGG ATAGCCTAGA GAAAAAGGAA TTGGATTTCT ATAGAAAATA TTACACGGCC
TTCACCAGGG CAAAAAACCT CTTGGTCCTT CTGGATAATT CGACAGATCG AAGAATAAAA
AACTTCGCAT ATACCCTCGA TTCTTCATCC AAGTTAAGCT CTATTGACTT TAAGATGGAA
GAGAGAAAAG ATGATAAGAA AATCCTAGCC TTTACCACAG ACATCGATGT CTATATGACC
TGCCCCCTAA AGTATAAATT TGTAAGGAAA CTTTCCTTTA GGACTAAGAA GACCGAAAGC
CTAATCTTTG GATCAAAGGT CCACAATCTA GCTCAATATA TCTACTCTCC TTCCTTTGAC
AAGAAGGATA TGACAAGCTT CTTGTGGGAA AATAAGGGAT ACATTGAGCC AGTTTCAAAC
CTACTAAACA GGGGATTTAA TGTGAAGCTA AGCGAGGCGA ACTACAAGGC GGATAGAGAT
TTTTATATCC TTCAAGGAAA TATTGACCTT ATTTTAGAAG ATTCCTCAAT CATGGACCTA
AAGACTGGGT CTTTTGATGA GAAAAGTCTC GCCAAATACA AAAAGCAACT TCTAACCTAT
AGACAGCTCC TCCTAGCTAA TGGCAAGGAA GTAGGGAAAA TCTACCTATA TTTTATAGAA
AAAGACGACC TAATCGAAGT AAAGGATGAA GGTTTTGACA TGGCTGCTAT AGATGATGTG
GCTAGGGAGA TCGTTAGAGA AAACTTCAAT CATAAGACCG AAGATAGGAA AGCTTGTAAG
TTCTGTCCTA TGAAGCACTT CTGCGAGCGA GCTTGA
 
Protein sequence
MRNLGQEEII KNAKLPAVVI AGPGTGKTHT IVGFVAEAIK EGKFPANKVL ITTFTKKAAR 
ELNTRIITRL RKDGLDTDLE DMKIGNFHSL AISFISKYRR LDDNFFNLTI IDSNMEEFIV
EENLEIFTSL PHFEDFIVKD YATATILDIF QTLINQMIDP LSLRDSASPQ DKLAYEIFTT
YEKLLDSLGL INFQLILKRF LDLLKDPIIG EKIREEIDLV VIDEYQDTNL IQEEIAINLT
KNGNIIVFGD DDQALYSFRG ADARNLTHFD EKFYQRTGIR ASKYFLNINY RSNQVIIDKA
RAFMDEAKGS SKKDLKSNKA EENPNTIVRA RADEMDNIVM IVKLLSKKIK LGQIAFLFPS
FNNSYPSILQ KKFENAGIKV INRKSDGYFR REEIRLIIFV LLKIARTGPI NTDFRGGKMT
YGQRQKLDYR NFLKEIYEDD KFKENRKLRN FIEDFSESYS ISDLIYKLMG LETFKDILKD
KNQDKKDLIF KNISKFINLA VDYDEIFEET NSYYQKFIFS YIFIYFKKNA IGEFDEDDVY
DDSINFMTIH QSKGLEFEAV FVSSLGDYPR RDYDKFTDRF VEKDSLEKKE LDFYRKYYTA
FTRAKNLLVL LDNSTDRRIK NFAYTLDSSS KLSSIDFKME ERKDDKKILA FTTDIDVYMT
CPLKYKFVRK LSFRTKKTES LIFGSKVHNL AQYIYSPSFD KKDMTSFLWE NKGYIEPVSN
LLNRGFNVKL SEANYKADRD FYILQGNIDL ILEDSSIMDL KTGSFDEKSL AKYKKQLLTY
RQLLLANGKE VGKIYLYFIE KDDLIEVKDE GFDMAAIDDV AREIVRENFN HKTEDRKACK
FCPMKHFCER A