| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1494 |
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| Symbol | |
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| ID | 8398306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1628047 |
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| End bp | 1628745 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644995858 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003153236 |
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| Protein GI | 257066980 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTAG ATAAGATGAT AGGAAACTCT GGCCTAGATA CCAGAAAAAA TATAAAGAAA
AATGCCAAGA AGGGAGCTAT CCTTGTAAAT GGCGAAGTAG TAAAAGATAC AGCAACCCAG
GTCGACCCAG AAGTCGATGA AGTATACTAT ATGGGTCATT TCGTAGATTA TTTCGAAAAT
ATTTATGTTA TGATGAATAA GCCTGCGGGC TTTCTTTCGG CGACAGAAGA CAAAGACCCA
ACTGTAATAG ATCTCTTGGA TGATTTCTAT AAAGTAATCG ACTTATCAAT AGCAGGAAGG
CTCGATAAGG ATACTACAGG CCTCCTCCTT CTTTCAACAG ATGGTAAGTT CATCCACAAG
GTAACAAGCC CAAATTCTAA TATAGAAAAA ACCTATCTTG TAGAATGTAG AGATAAGATA
GATGAGAGCC TAATAGACTT ATTCAAAGAA GGAGTCTATA TCAAAGAAGA TGACTACACA
GCAAGAAGTG CCAAGCTTGA GATATTAGAA GAGAAAAAGG CAATAGTCAA GGTTACGGAA
GGTAAGTTTC ACTTAGTAAA AAGACTATTT TCAAATTGTT GCAACAAGGT GGAAAAGCTC
AAAAGAATTG CCATAGGAGA CTTATCCCTA GACGAACACT TGGCAGAAGG CGAGTATAGG
GAGTTAAGTG ATGATGAAAT ATCCCTACTT ATGGAGTAA
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| Protein sequence | MRLDKMIGNS GLDTRKNIKK NAKKGAILVN GEVVKDTATQ VDPEVDEVYY MGHFVDYFEN
IYVMMNKPAG FLSATEDKDP TVIDLLDDFY KVIDLSIAGR LDKDTTGLLL LSTDGKFIHK
VTSPNSNIEK TYLVECRDKI DESLIDLFKE GVYIKEDDYT ARSAKLEILE EKKAIVKVTE
GKFHLVKRLF SNCCNKVEKL KRIAIGDLSL DEHLAEGEYR ELSDDEISLL ME
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