Gene Apre_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1487 
Symbol 
ID8398299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1619887 
End bp1621719 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content34% 
IMG OID644995851 
ProductCna B domain protein 
Protein accessionYP_003153229 
Protein GI257066973 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4932] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGG AGAGAAAATT TAGACTGGTG GCATTCATCC TACCAATTCT AATGCTTATT 
CAAGCCTTTT TCCTTGCGCC TGTGGGTTTG GCTGAGGAAG AGGCGAAAAA AGTGACTTAT
ACCATACACC TTGATTTTTC AATCAAAGAT ACTTCGGTTA AAGAATCTAG TGCAAGACAG
GTTAAGCTTT GGAAAATACC ACAAGATAAG CTAAAAAAAG ATCAGGCTGG TGAGGTTGAT
AGACTTTCTA TGGCCAAAAA ATATGATGAT ATGAAGGAAG AAGATATCAT AAAAGATCTC
GGGGAAGAAA TCCTTACAAG CGAAGAGTCT AAAATCAATG AAAATGGCGA TAAAGAAAGA
ATTAGCCTAC AAATAGAACA GGAAGAAAAT GAAGAATCTT ATTATCTTAT AAAAGAAAGT
GAAGAATCTT TCGCTAAGAT GAAGGATAGA ATTGATTCAG GAAAATCTTC TAAGCTTACT
ACAACAGTAT TAAAAGTACC TAATGATGAA TTTAAGAATA ATGAATTACT TATTAATCTT
AAAGATAGTC CAAAGACTAA GGATTTAAAA ATAATAAAGG TAGATGCTGA TAATCCTAAT
ATCAAGTTAG ATAAGGTTCA GTTTAAATTA TTTAAGAGAG TAGGAAATAC AGCTGAAGAT
AATAATATTT CTGAAGAAAA GTATAATGAT ATTCCGATTG AAGTAGAGGG AAGCTTTGGT
ACTTATAAGT TCAAATCCGA AATAGAAGAT GAAAAACTTG CTACAGTATT ACAAACCAAC
ACAGACGGAG AAATAACAGT TTCTGGTCTT GAAGAAAATT CTTACTATGT ATTCAAAGAA
GTTAAGGCTA TTGAAGGTTA TGATAAAACT TTAAATGAAG GTATTATCTC TGAAGCCAAA
AAGCCTGGTG AAGGCGATAT TATATTTAAA AATAAGAGAA TCCCAACATT AATCAAATAT
GCTAAAGATA CTGGAAAAAT GCTTGATGGA GTAAAGTTTT CTGTTTATAA GAAAGACGGC
GAAGATAAAC TTAAGTTTAG ACAAGGAGAA ACTTCTGGCG AATATATTTA TGATGAAGCA
GGAGATCTTA CAGATATCGA AACCAAATCT GGTGGTAAGA TCTATCTTCG TGAATTGCCA
GCAGGAGACT ATTATTTTAA AGAGATAACT GCTGCAGAAG GATATATAAA GTCTGAGGAT
TCTTATGAAT TTAGCGTTGA TGAAAACCAC AATATAAAAG TTAACGGTAA AGCTGAATCT
CTAAAGGTTG AAAACGTGCC TGAAAACGAA AATCCAACAC CACCAGGAGA AAATCCTAAG
GGAAGTCATA AGTTTATCAA AGTAGACAAA GATGACCACG GCAAAAAGCT AGCTGGAGCT
AAGTTTAAGG TTCAAAAGCT AGTAGACGAT AAGTATATGA CAGTAGTTAG AGATGGCTCA
GAATACATCG TAGAATCAGA TGCTAATGGA GCCTTAGAGG TAACAGATCT AGAATATGGC
CACTATAGAC TAAAAGAAGT AGGCTTTCCA GAAGATTACA ATCCAGTTGT TGAATTTACA
GAATTTGATA TAAGCGCAGC ATCATCTTTG AATACGCCTG CTCTTATAGA AAATGAACAC
AAGCCACCAA AAGAGGAAAC GCCTCCTCCA ACACCACCAA CACCACCAGA AACTCCTTCT
ACTCCAACCA AGACACTTAC CTCAAGGAGT CGTGGTCCAT TAGTTAAGAC TGGAGATATT
AGAATTTGGA TTTATTTTGC TATTGGTTTG ATTATGATCG TGGCAGGATT TATCATTATC
AGAAATCAAG ATAAAAAACA AGAACTTGCA TAG
 
Protein sequence
MKRERKFRLV AFILPILMLI QAFFLAPVGL AEEEAKKVTY TIHLDFSIKD TSVKESSARQ 
VKLWKIPQDK LKKDQAGEVD RLSMAKKYDD MKEEDIIKDL GEEILTSEES KINENGDKER
ISLQIEQEEN EESYYLIKES EESFAKMKDR IDSGKSSKLT TTVLKVPNDE FKNNELLINL
KDSPKTKDLK IIKVDADNPN IKLDKVQFKL FKRVGNTAED NNISEEKYND IPIEVEGSFG
TYKFKSEIED EKLATVLQTN TDGEITVSGL EENSYYVFKE VKAIEGYDKT LNEGIISEAK
KPGEGDIIFK NKRIPTLIKY AKDTGKMLDG VKFSVYKKDG EDKLKFRQGE TSGEYIYDEA
GDLTDIETKS GGKIYLRELP AGDYYFKEIT AAEGYIKSED SYEFSVDENH NIKVNGKAES
LKVENVPENE NPTPPGENPK GSHKFIKVDK DDHGKKLAGA KFKVQKLVDD KYMTVVRDGS
EYIVESDANG ALEVTDLEYG HYRLKEVGFP EDYNPVVEFT EFDISAASSL NTPALIENEH
KPPKEETPPP TPPTPPETPS TPTKTLTSRS RGPLVKTGDI RIWIYFAIGL IMIVAGFIII
RNQDKKQELA