Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1486 |
Symbol | |
ID | 8398298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1618881 |
End bp | 1619831 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644995850 |
Product | sortase family protein |
Protein accession | YP_003153228 |
Protein GI | 257066972 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGATTT TACGTAAAAA TAAAGAAAAT AAAAATATTA AGAAACAACC TTCCAGAAGG GCCAAGTGGA CCTTTAGGCT TGTTTTCTTC TTGGGTTTCT TGGTAGCTCT CTATCCTCTT GTAAATAGAC TCTACTACAG GATTGATTCC AACAACCAAG TATCAGTCTT TAACGAAGGT ACCGACAAGC TAGCGACAGA AGAAATCGAA AGAAGGATGG GACTTGCCCG TGCTTACAAC GACTCCTTGA ACAATGCTGT CTCCGAAGAC CCTTATGCCA AGGACAAGCA GGAAAAGGGA AGGGCAGAGT ATGCGAGAAT GCTTGAAGTC CACGAGATGA TAGGCCACGT TGAGATACCA AAGATCAACC AAGACCTGCC AATCTATGCA GGAACTGCTG AGGAAGTCCT CCAAAAGGGA GTAGGGCACT TGGAGGGAAC CTCTCTTCCA ATCGGCGGTA ACTCTACTCA TTCTGTCCTT ACAGCCCACT CTGGTTTGCC TGAGGCAACT CTCTTTACCC ACCTGGGAGA GCTTGAGATA GGCGATAAGT TCTACGTCCA CAATATTTCA GAAACCCTAG CCTATCAGGT CGATCAAATC AAGGTTATAG AGCCAACCAA TTTCTCAGAC CTATTAATCG ACCCGGGTCA TGATTATGTA ACCCTTCTTA CTTGTACTCC AATAATGATT AACTCTCACA GACTCATTGT TAGAGGCCAC AGGGTGCCAT ATGTACCTGC TGTAGACGAG GAGTTAATCA GAACGACCAA GGCAAACTGG ATCTTTAGAC TCTTATTCTT CATAGCCCTA TTCTTGATTA TTATATTGAT AATCTACCTA TGGAAGCTAA GAAGAGATAA CAAGAAATAT TACACAAGGA TTGAAGATAT CAGAAGAAGA CAAGATAAAT TGATGAATAA GTCCAAGAAG GTGAAAGAAG ATGAAGACTA A
|
Protein sequence | MAILRKNKEN KNIKKQPSRR AKWTFRLVFF LGFLVALYPL VNRLYYRIDS NNQVSVFNEG TDKLATEEIE RRMGLARAYN DSLNNAVSED PYAKDKQEKG RAEYARMLEV HEMIGHVEIP KINQDLPIYA GTAEEVLQKG VGHLEGTSLP IGGNSTHSVL TAHSGLPEAT LFTHLGELEI GDKFYVHNIS ETLAYQVDQI KVIEPTNFSD LLIDPGHDYV TLLTCTPIMI NSHRLIVRGH RVPYVPAVDE ELIRTTKANW IFRLLFFIAL FLIIILIIYL WKLRRDNKKY YTRIEDIRRR QDKLMNKSKK VKEDED
|
| |