Gene Apre_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1475 
Symbol 
ID8398285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1610257 
End bp1611117 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content40% 
IMG OID644995838 
Productprotein of unknown function DUF161 
Protein accessionYP_003153217 
Protein GI257066961 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AGAAGAGGAT ATTTTTGATG AGTTTCGCAG CGATCTTTAT GGCCTGCGGA 
ACCCACTTTT TCAAATATCC TAACAGCTTC GTAATAGGAG GAGTCGAGGG AATGAGTATC
ATAGCGAGTA TGTTTGTGCC CTTCACTAGG CCCCAGCTTA CCTTGTTTAT CAACTTAACC
CTACTTGCAA TTGCCTTTTT TGTTCTGGGA AAGAAATTTA CCTTAAGGAC CGGCTATGTT
GCAATCCTTA ACTCTCTAGC AGCCCTTGCC TTGGATAAGA TTATTCCAAT CAATGGGACC
CTTACTGATA ACACCATGCT CGAGCTATTT TTCACCCTCA TAATGAGCTC GGTTGGATCT
GCTATCTTGT TTAACATAGC AGCTAGCTCT GGCGGAACTG ATATCATTGC CATGATAGTC
AAAAAGTATA CCCATCTAGA AGTAGGTAAG TCGCTTCTTT TCGTAGATTC GCTCTTTACA
TTTGCTTCAA TTTGGGTATT TGGCATAGAG ATTGGACTAT TTTCTATCTT TGGTCTCCTT
GTCAAGGGAC TTTGTGTAGA TATAATTATT TCATCTATGA ATCAGGCCAA GATGTTTATA
ATCATAACAT CAAAGACCGA GGAAGTAGGA TCGTTCATAA AAGATGACCT AAACAGGTCT
GCGACCGTGA TTAATGCCAA GGGCCTATAT ATGGGAAGAG ACTTTACAGT CTACCTATGC
ACTACAAGCA AGATGGAAGC ACCTAAGTTT AGGGTATTTA TCAAAAACAT AGACCCAAAA
GCCTTTATAA CAGTCCTAAA CACATCGACA GTTATGGGCA AGGGCTGGTA TCAAACAGAT
GAAATATCTG ACAATAACTA A
 
Protein sequence
MSKQKRIFLM SFAAIFMACG THFFKYPNSF VIGGVEGMSI IASMFVPFTR PQLTLFINLT 
LLAIAFFVLG KKFTLRTGYV AILNSLAALA LDKIIPINGT LTDNTMLELF FTLIMSSVGS
AILFNIAASS GGTDIIAMIV KKYTHLEVGK SLLFVDSLFT FASIWVFGIE IGLFSIFGLL
VKGLCVDIII SSMNQAKMFI IITSKTEEVG SFIKDDLNRS ATVINAKGLY MGRDFTVYLC
TTSKMEAPKF RVFIKNIDPK AFITVLNTST VMGKGWYQTD EISDNN