| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1434 |
|---|
| Symbol | |
|---|
| ID | 8398244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1554390 |
|---|
| End bp | 1555631 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644995799 |
|---|
| Product | diaminopropionate ammonia-lyase |
|---|
| Protein accession | YP_003153178 |
|---|
| Protein GI | 257066922 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family
[TIGR03528] diaminopropionate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGAAC AATATAAGAT AGTACTAAAT GATATTAGTA AAAGAGAAAA GGCTTCCCTA
GATTTTATCA ATGAGGAAGT TGTTAACACT GCACAAAAAT TTCATGAGAG TTTCCCTGAT
TATGAGCCAA CTCCACTGGT AAGACTAAGT AACCTCGCCA AGCAATTTGG TGTAAAGGAT
ATCTTCGTAA AAGATGAATC TTACAGATTT GGTCTAAATG CCTTCAAGGT ACTTGGTGGA
TCATTTGCCA TTGGAAAATA CATAGCTGAT AAGTTGGGAG TTGATATCGA AGAATTACCA
TTTGAGAAAA TGATTTCAGA CGAAGTGCGA GAAAAGCTTG GGGATATTAC CTTCGTAACA
GCGACAGACG GAAACCACGG TAGGGGAGTA GCCTGGACTG CCAACCAACT TAAGCAAAAA
TGCGTGGTAA TCATGCCAGA TGGATCAGCT ACAGAAAGAC GTGACAACAT CAGAGCCTTG
GGAGCAGAAT GCGACATAAT GGATGGTCTC AACTACGATG ACTGCGTTCG TCTTGCCAAT
AAGAACGCTG AGGAAAAAGG TTGGGTAATG GTTCAAGATA CAGCTTGGGA AGGATACGAG
AAGATTCCAA CATGGATCAT AGAAGGATAT GCAACCCTTG CTAAGGAAAG TAACGACCAA
CTAAAAGAAG CAGGTCTTAA ACCAACACAC ATCTTCGCTC AAGCCGGAGT AGGTTCTTTT
GCAACAGGAG TTACCGGATA TTTCTCTTCA GTATATGAGG GAGAAGAAAA GCCATTCATA
ACTATAGTAG AGCCAGAAAA AGCAAACTGT AACTTCATCA CAGCTAAGGC AGATGATGGA
AAGATCCACA ATGTTACTGG CAAGATGGAT ACAATAATGG CAGGACTTGC TTGCGGTGAG
CCTGTAACAG TAGGCTGGCC AGTACTTCAC TCATATGCAG ATGCCTTCCT ATCAGTTCCA
GATAAGGCAG CAGCAAGAGG AATGAGAATT CTAGGCAATC CTTTAAAGGA CGACAAGAAG
ATAATCTCAG GAGAAAGTGG AGCAGCAACC ATGGGTCCTC TCTCAGAAAT CCTCCAAAGG
AAAGATTTAG AAGAGATTAA AAAAGACCTA AAGCTTGACG AAAATTCAGT AATCCTTCTA
ATCTCAACAG AAGGGGATAC AGACTACGCT CACTACAGAA GAGTAGTTTG GGATGGAATC
TATCCAAACG AAGAAGAATA CACATACTCA ATACAAAGAT AA
|
|---|
| Protein sequence | MEEQYKIVLN DISKREKASL DFINEEVVNT AQKFHESFPD YEPTPLVRLS NLAKQFGVKD
IFVKDESYRF GLNAFKVLGG SFAIGKYIAD KLGVDIEELP FEKMISDEVR EKLGDITFVT
ATDGNHGRGV AWTANQLKQK CVVIMPDGSA TERRDNIRAL GAECDIMDGL NYDDCVRLAN
KNAEEKGWVM VQDTAWEGYE KIPTWIIEGY ATLAKESNDQ LKEAGLKPTH IFAQAGVGSF
ATGVTGYFSS VYEGEEKPFI TIVEPEKANC NFITAKADDG KIHNVTGKMD TIMAGLACGE
PVTVGWPVLH SYADAFLSVP DKAAARGMRI LGNPLKDDKK IISGESGAAT MGPLSEILQR
KDLEEIKKDL KLDENSVILL ISTEGDTDYA HYRRVVWDGI YPNEEEYTYS IQR
|
|---|
| |