| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1426 |
|---|
| Symbol | |
|---|
| ID | 8398236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1542647 |
|---|
| End bp | 1544026 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644995791 |
|---|
| Product | Xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_003153170 |
|---|
| Protein GI | 257066914 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000668836 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA ATACTAATCA AGCTGTCTCA AAGTCATTGT TTGACCTTGA TGGCAAGCCT
GAATTTAAGA AGGCCTTCCC CATAGCCCTT CAGCATTTGT TGGCAATGAT CGTAGGAAAT
ACCCTGCCTG CAATCGTTTT GACAAATACT TTGGCTAATA CTGAGCATGC CCTAACAGCG
GCAGAGTCAA TTTATCTTAT CCAAGCAGGA ATGTTTGTAG CAGCCCTTGC TACCTTCCTT
CAACTTTACC CAATAGTTAA ACTTGGACTT GGATCAAGGC TTCCTATGGT AATGGGAGTA
TCCTTTGCCT ATATACCTGT AATTAACTCA GTTGCAGTCA AATACGGTAT AGGAGCAGTC
TTTGCCTCCC AGATAGTAGG TGGTGTAATA GCCTTCCTTG TTGGAATGAA TATCAAAAGA
CTCTACAAAT ACTTCCCACC AATGGTATCG GGAACAGTTG TTCTTACAAT AGGTCTTTCT
CTCTACTCAG TTGCCCTAAA CTACATGGCA GGAGGAAATG GAAACCCTAA CCAAGGAGCT
ATGGTCTATT GGATAGTAGC CTTCATCACT CTTGCAGTTG TTCTTATTTG TAATATGTTT
GGTAAGGGTC TTGTAAAGCT TTCTGCAATC CTTATAGGAA TCGTAGCAGG CTACATTGCA
TCTCTTGCCT TTGGTATAGT GGATTTCTCT AAGCTATCTG ATGCAGCTTG GCTTACAATC
CCAAAAGTTA TGCCATTTAG CCTAGACTTC CACCTAGATG CTTGTATCAC AATGGCGGTT
ATGTTTACAG TAAACTCCAT CCAGGCAGTA GGAGACTTCT CTTCTACCAC AACAGGTGGA
CTTGATAGAC AACCAACAGA GAAGGAACTT GAGGGCGGAA TCAAGGGCTA CGGTCTTACA
AATATGGTAT CAGCCTTCTT TGGAGGACTT CCTACAGCAT CTTATTCACA AAACGTTGGT
ATAGTGTCCC TAACAAAGGT TGTTTCAAGA CACGTGCTTA AGATTACTGC TACTATGATA
CTTATAGCAG GATTTATTCC AAAGTTTGGT GCTCTAATGC TTTCTGTACC TCAAGCTGTA
ATAGGTGGAG CGACAGTAAC AGTATTTGCC CAAATCACTA TGAGTGGAAT GAGACTTATC
ACATCTGATG AGATGAGTGT GAGAAATGTA ACAATAACAG GACTTGCAAT CGCACTAGGT
ATGGGAATCA CCCAGGTAAA CCCAGTAGCA ATCGAACAAT TCCCAGAATG GTTTAGAATG
ATATTTATCT CTTCACCTGT AGTTCTTTCA ACTCTTGTAG TTTTCTTCCT AAATATAATT
CTTCCAAAGA AGACTATCGA AGAAGAAGAA CGTGAAAGAG AAATGATGGA TAAGGAATAA
|
|---|
| Protein sequence | MEKNTNQAVS KSLFDLDGKP EFKKAFPIAL QHLLAMIVGN TLPAIVLTNT LANTEHALTA
AESIYLIQAG MFVAALATFL QLYPIVKLGL GSRLPMVMGV SFAYIPVINS VAVKYGIGAV
FASQIVGGVI AFLVGMNIKR LYKYFPPMVS GTVVLTIGLS LYSVALNYMA GGNGNPNQGA
MVYWIVAFIT LAVVLICNMF GKGLVKLSAI LIGIVAGYIA SLAFGIVDFS KLSDAAWLTI
PKVMPFSLDF HLDACITMAV MFTVNSIQAV GDFSSTTTGG LDRQPTEKEL EGGIKGYGLT
NMVSAFFGGL PTASYSQNVG IVSLTKVVSR HVLKITATMI LIAGFIPKFG ALMLSVPQAV
IGGATVTVFA QITMSGMRLI TSDEMSVRNV TITGLAIALG MGITQVNPVA IEQFPEWFRM
IFISSPVVLS TLVVFFLNII LPKKTIEEEE REREMMDKE
|
|---|
| |