| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1413 |
|---|
| Symbol | |
|---|
| ID | 8398223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1526801 |
|---|
| End bp | 1528585 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644995778 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_003153157 |
|---|
| Protein GI | 257066901 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAG AGATTAGAAA TTTGAAGAAA TATTTTGGCT ATGATTCTTT TAGGGAGGGC
CAGGAGGAGA TTATAAAGGA GATCCTCGCT GGTAGGGATG TGCTCGGCGT CCTTCCTACT
GGTGGGGGTA AGTCTATTTG CTACCAGCTT CCTGCCCTTA TGATGGATGG AATCAGCCTT
GTCATATCTC CCTTGATTTC TCTAATGAAA GACCAGGTGG ATGCCCTTAG GGAAAATGGG
ATCGCCGCGA GTCTTATCAA TTCTTCCCTA AGCCTTGAAG ATTACAAGAA AAGTCTATCT
GAGATAAGGT CAGGTGCTGT TAAGCTTGTC TACATATCAC CAGAAAGACT CGAAAATGAC
TTTTTCATAG ACTTTCTAAA AGACTTTAAG GTCTCATTTG TAGCAGTAGA TGAAGCCCAC
TGTATTTCTC AATGGGGCCA TGACTTTAGG CCTTCCTACA AGCTAATCCC CAAGCTTTAC
GAGACTTTCG ACAAGGTTCA AATCACAGCT TTTACTGCCA CTGCAACCAA GGAAGTAAGG
GATGATATAA TAGAAAACTT GGAATTGGAA GATCCTTTTG TCAAAGTTAC AGGATTTGAT
AGGAAGAATC TCCTCTTTCT AGTAGAAAAA CCAAAGAAGA AAATAAACTA CCTCAAGGAC
TTCTTAAGTA ACCACGAAGA AGACTCAGGT ATTATCTATG CCTCGACTAG GAAGAAAGTC
GACGCTATCC ACAAGAAGCT TAAGTCCATG GGCTATGCTT GCGGGAAATA TCATGCTGGA
ATGACTGAAA GCGAGAGGAA AAAGAGCCAG GATGCCTTTA TCTATGATGA GGATAAGATA
ATTGTTGCGA CTAATGCCTT TGGTATGGGG ATTGATAAGT CTAACGTAAG ATATGTCATC
CACTACAATA TGCCCAAGGA CATGGAATCC TACTACCAAG AAGCAGGAAG GGCAGGCCGT
GATGGAGAGG AGGCTACTTG TATCCTCCTT TACTCAGGTC AGGATATAAT CATAAACAAG
CACCTCATAA ATATGGGAAC TAACCGAGTA TACAAGAGAA TCCAGCTAGA AAAGCTCCAG
ACTATAATCA ATTATGTAAA TACCACAGCC TGTCTAAGAC AATATATACT CAATTATTTT
GGCCAAGATG CGGCGGATGA GTGTGGAGCC TGCACCAATT GCCTATCAGA GATAGAAAAG
GAAGATGCAA CAGTAGATAG CCAGAAAATC TTATCCTGCA TCTACCGCCT AGACCAAAGA
TATGGAACAT CTACTGTAGT CGATTGCCTG ATGGGATCAA AGAATAAAAA CGCTAGGGAG
AAAGAACTAA ACAAGATCTC AACCTATGGG ATTATGAAAG ATAAATCCAA GACCTACATC
AAAGACTTGA TAGGAACTCT CACAGCAGAT GGATATATCA AGGTCTCAGG CACAACTTAC
CCTATCCTTA AGCTTACAGA AAAATCCAAG GACGTCCTTT TCGGAGAGGT CAAAGTCCTA
GTCAATATCA GAAAGGAAGA AGAAAGAGTC AGGAAAGACG GCTTCGATGA TAAGTTAAGC
TATGACGAAA AGCTCTTCAA ACACCTGAAA GAAGTGAGGT TAGATATGGC AAGAATGAGA
AATATCCCAC CCTTCATAAT ATTTTCCGAC GCAAGTCTTA AAGAAATGTC CCAGAAAAAA
CCAAGAACAG AAGACGAAAT GCTAATGATC AAGGGAGTAG GAGACAAAAA ACTCCTCCAA
TATGGGGATA TATTTCTGGC GGAGATTAGG GAATTTGAGA GATAA
|
|---|
| Protein sequence | MTEEIRNLKK YFGYDSFREG QEEIIKEILA GRDVLGVLPT GGGKSICYQL PALMMDGISL
VISPLISLMK DQVDALRENG IAASLINSSL SLEDYKKSLS EIRSGAVKLV YISPERLEND
FFIDFLKDFK VSFVAVDEAH CISQWGHDFR PSYKLIPKLY ETFDKVQITA FTATATKEVR
DDIIENLELE DPFVKVTGFD RKNLLFLVEK PKKKINYLKD FLSNHEEDSG IIYASTRKKV
DAIHKKLKSM GYACGKYHAG MTESERKKSQ DAFIYDEDKI IVATNAFGMG IDKSNVRYVI
HYNMPKDMES YYQEAGRAGR DGEEATCILL YSGQDIIINK HLINMGTNRV YKRIQLEKLQ
TIINYVNTTA CLRQYILNYF GQDAADECGA CTNCLSEIEK EDATVDSQKI LSCIYRLDQR
YGTSTVVDCL MGSKNKNARE KELNKISTYG IMKDKSKTYI KDLIGTLTAD GYIKVSGTTY
PILKLTEKSK DVLFGEVKVL VNIRKEEERV RKDGFDDKLS YDEKLFKHLK EVRLDMARMR
NIPPFIIFSD ASLKEMSQKK PRTEDEMLMI KGVGDKKLLQ YGDIFLAEIR EFER
|
|---|
| |