Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1407 |
Symbol | |
ID | 8398217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1512517 |
End bp | 1514487 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644995772 |
Product | excinuclease ABC, B subunit |
Protein accession | YP_003153151 |
Protein GI | 257066895 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA ATTTAAAATC GGATTATAAA CCTAGAGGCG ATCAGCCTTA TGCTATAGAT AAATTATCAA AGGGAATCGA GGCGGGAGAC CATCATCAGA TTCTCCGTGG TGTAACAGGT TCTGGTAAGA CCTTTACCAT GGCTAATATT ATCCAAAATG TCCAAAGACC TACCCTAGTT CTTGCCCACA ACAAGACTTT GGCCTACCAG CTTTTTACGG AGTTTAAGGA ATTTTTCCCG GACAATGCTG TCGAGTATTT CGTTTCCTAC TATGATTATT ACCAACCAGA AGCCTATGTG GCTGCTACAG ATACATATAT TGCCAAGGAC TCTTCTATTA ATGACGAGAT AGACAAGATG AGGCACTCTG CGACCATGGC TCTTTTTGAG AGGCGTGATG TTATAATTGT GGCTAGTGTT TCTTGTATTT ACGGCTTGGG AGATCCTATC GAGTATCAAA AGCTTGTAGT ATCCCTCCGT CCAGGTCAGG AGATTAGCCC GGAAGATGTT ATGAGAAAGC TAATTGATGT CCAATATGTG AGAAATGATG TGGAGTTTAG CCGAGGGACT TTCAGACGTA GGGGAGATAT CTTAGATGTT TTCCCAGCAG GTTTTGACCA AAAGGCTATT AGATTTGAGT TTTTCGGAGA TGAAATCGAC GAGATTTCGG AGTTTGATTC ATTGACAGGT AAGGTTACTG CAAGGATTAG CCACGCTTAT ATTTATCCTG CCAGCCACTA TGCGACATCA AGTGAGAAGA CAGAAAAGGC CATCATTACT ATAGAAGAAG AACTTGAGGA AAGATTGGCC GAGCTTAATT CGGAAAATAA GCTCCTTGAA GCCCAAAGGC TCGAGCAAAG GACCAAATAC GATATAGAGA TGCTCAGGGA GATTGGTTTC TGTTCTGGAA TTGAGAATTA CTCTAGACAC TTAAGCCAGA GACCAGCAGG GTCTAGGCCT TATACCCTAA TCGACTATTT TCCAGAAGAC TTCGTCCTAA TGGTGGACGA GTCCCACGTT TCTATTCCCC AGGTTGGAGG AATGTATGAG GGAGATAGGT CCCGTAAGCA AAACTTGGTT GACTACGGCT TTAGGCTTCC TTCTGCCCTA GATAACAGGC CGCTTAAGTT CGACGAGTTC GAGAAACTAA TCAACCAGGC AGTTTATGTT TCAGCAACTC CAGGCCCTTA TGAGAAGGAG AAAACCCATG GCAAGATGGT CGATCAAATC ATAAGACCAA CTGGGCTTTT AGATCCATTG ATAGAGGTAA GGCCAACAGC AAATCAGATA GACGACCTCA TAGAAGAAGT CCATGCGACC ATTGCCAAGA AGGAAAGGGT ACTCGTTACT ACTCTTACCA AGAAGATGGC AGAAGACCTT ACGACCTTCC TTACGGAAAA TGGAATCAAG GTAAGATACC TTCACTCAGA TATTAAAACT ATAGAGAGAA GTGAGATTAT TAGAGAGCTC CGTCTAGGAG AGTTTGATGT TCTTGTAGGA ATCAACCTCC TCCGTGAGGG ACTCGATATA CCAGAAGTTT CACTTATAAC AATCCTCGAT GCTGACAAGG AAGGCTTCCT CCGCTCTGAA ACTTCCCTTA TCCAGACTAT CGGAAGGGCA GCGAGAAACT CCGAGGGTAG GGTAATCATG TATGCCGATA CCATAACTGG ATCTATGAGA AGGGCGATTG ATGAGACAGA ACGCCGTAGG ACCATACAAG AAGAATTTAA TGAAAAGCAC GGCATAGTGC CAACTACAAT CAAGAAAAAT ATAGCTGAAA TCATCCAAAT CACCAAGAAG AAGGAAGAAG AGGAGATTGA AGAATTCAGC AAAGACGATA TAGAAACAAT ACTAATTAAT CTGGAGGCTG AGATGTATAA GGCAGCAGAG GAGCTTGACT TCGAGCGTGC CGCAGCCCTC CGTGATCAGA TTAAGTCTAT GAAAGATAAT TTTACAGGAG TGATTAATTG A
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Protein sequence | MKFNLKSDYK PRGDQPYAID KLSKGIEAGD HHQILRGVTG SGKTFTMANI IQNVQRPTLV LAHNKTLAYQ LFTEFKEFFP DNAVEYFVSY YDYYQPEAYV AATDTYIAKD SSINDEIDKM RHSATMALFE RRDVIIVASV SCIYGLGDPI EYQKLVVSLR PGQEISPEDV MRKLIDVQYV RNDVEFSRGT FRRRGDILDV FPAGFDQKAI RFEFFGDEID EISEFDSLTG KVTARISHAY IYPASHYATS SEKTEKAIIT IEEELEERLA ELNSENKLLE AQRLEQRTKY DIEMLREIGF CSGIENYSRH LSQRPAGSRP YTLIDYFPED FVLMVDESHV SIPQVGGMYE GDRSRKQNLV DYGFRLPSAL DNRPLKFDEF EKLINQAVYV SATPGPYEKE KTHGKMVDQI IRPTGLLDPL IEVRPTANQI DDLIEEVHAT IAKKERVLVT TLTKKMAEDL TTFLTENGIK VRYLHSDIKT IERSEIIREL RLGEFDVLVG INLLREGLDI PEVSLITILD ADKEGFLRSE TSLIQTIGRA ARNSEGRVIM YADTITGSMR RAIDETERRR TIQEEFNEKH GIVPTTIKKN IAEIIQITKK KEEEEIEEFS KDDIETILIN LEAEMYKAAE ELDFERAAAL RDQIKSMKDN FTGVIN
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