Gene Apre_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1405 
Symbol 
ID8398215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1507907 
End bp1508734 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content39% 
IMG OID644995770 
ProductCof-like hydrolase 
Protein accessionYP_003153149 
Protein GI257066893 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAT TAATAACAAT AGATGTGGAC GGAACTTTAG TAACTCCACT TAAAAGATTA 
ACAAAGAAGA ATAAAGAAGC GATCAAAAAA GCAAAGAAGG AAGGCATTCA CATTGCCCTA
GTTAGCGGCA GACCCTTCCA TAGCATGATT CATCTTATAG AAGAATTAGA CCTAGCCCAA
AAGGGGCATT TTACAATCTG CCAAAACGGA TCTTACATCT ATGATAACTT CACAAGAAAG
CCAATGTTTG GGACCCACCA AAGCCCAAAA GACCTCTTTA TAGTAGATAG GATGCTTGAA
GGCTTTAAGC TTGAATTATC TAGTATGGAT GACGAGGGTT TTTACACCAG ACACAAAAAC
CCAAACTTCT ATACAAAAAT GGACGCAAGA ATAAACAAGC TTCCAATAAA GACAGTAGCC
TACAAGGATT GGCCAGAAGA TAAGGATTTT GGGAGATTTC TTATCCTAGG ATCCGCAAGC
GAGATAAGCC GCTTTATCAA AAATATGCCA AAAGCCTTAA AAGAAAACTA CTACCCAGTC
CAAACTGCAC CTTTTCTAAT AGAGGTGATG AACAAAAACA CCAACAAGGG CTACGCCATA
GGACAAATGA TAGAAAGACT GGGCCTCGAT ATGAGTGAAG TCATGGCAAT AGGAAACGAA
AAAAACGACA TCCCCATGCT AGAAAAAGCA GGCTTTGCCG TAGCTATGGG TAATGCCGTT
GAAGAACTCA AAGTCCACGC TGACTTCATA ACAAAATCCA ACTTAAACTC TGGGGTTGGC
TATGCGATTG AGAAGTTACT GGACAATGGG AAGGAGAGAT ATTTTTAA
 
Protein sequence
MIKLITIDVD GTLVTPLKRL TKKNKEAIKK AKKEGIHIAL VSGRPFHSMI HLIEELDLAQ 
KGHFTICQNG SYIYDNFTRK PMFGTHQSPK DLFIVDRMLE GFKLELSSMD DEGFYTRHKN
PNFYTKMDAR INKLPIKTVA YKDWPEDKDF GRFLILGSAS EISRFIKNMP KALKENYYPV
QTAPFLIEVM NKNTNKGYAI GQMIERLGLD MSEVMAIGNE KNDIPMLEKA GFAVAMGNAV
EELKVHADFI TKSNLNSGVG YAIEKLLDNG KERYF