Gene Apre_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1404 
Symbol 
ID8398214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1506711 
End bp1507823 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content41% 
IMG OID644995769 
Productalanine dehydrogenase 
Protein accessionYP_003153148 
Protein GI257066892 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTATTG GAATACCTAA AGAATTAAAA GATCAAGAAT CCAGAGTGGC AATCATTCCT 
GGAGCTTGTA CAGAACTAAC TAAATCAGGA AATAAAGTTA TTATAGAATC TGGAGCAGGA 
CTTGCGTCTG GAATTAGCGA TGAAGATTAT AAAGAAGCTG GAGCAGAAAT CGTAGAAACT 
GCAGCAGAAG TTTGGGAAAA TGCAGATATT ATCTATAAGG TTAAAGAACC ACTAAAGGAA 
GAATACAAGT ACTTTAGAGA AGGTCTTATT ATCTATACCT ACCTTCACCT TGCTAGTAAC 
CCAGAGCTAA CAGACGCTCT TATAGAAAAC AAGGTTACAG GAATTGGTTT CGAGACTGTT 
CAACTTGACG GAAAGCTACC TCTTCTACGC CCAATGTCAG AAATCGCAGG AAGAATGGCA 
GTTCAAGAGG GAGCGCAATA TCTTACAAAA CCAAAAGGTG GACGTGGAAT CCTACTTCAA 
GGTGTGCCAG GAGTTAGACC TGCCAACGTT GTAATCGTAG GTGCTGGTAC TGTAGGAACA 
GCTGCAACAA GAATAGCAGT AGGTATGGGA GCAAGAGTTA CAGTTCTAGA TGTAAATATC 
GAAGCCCTAA CTCAACTACA CAATATCTTC CCAGATAAGA TTGAAACACT CTATTCTAAC 
CCACTAAATA TCGAAGATGC AGTTAAAAAC GCAGACCTTG TAATTTCAAC AGTCCTAATC 
CCAGGTGCTC GTGCGCCACA ACTAATCAAA GAAGATATGG TTAAACAAAT GAAGGAAGGA 
TCTGTAATAG TGGACGTTGC AATAGACCAA GGTGGTTCAA CTGACCTAAC AAAGGGCAGA 
CCAACAAGCC ACACTAATCC AACATTTATT GAACACGGCG TAATCCACTA CGCAGTTGCC 
AACATCCCAG GTGCAGTAGC GATGACATCA ACCTACGCCC TATCAAACGC AACTACAAAA 
TATGCAAAGG CCCTAGCAGA TCTTGGATTA AAGGGAGCAT GTGAGAGATT CCCAGAGCTA 
ATTAAGGGAA TCAACACCTA TGAGGGTAAA GTAACATACG AACCTGTAGC TGAGGCTAAC 
GATAAGGAAT ATGTAGAGCT TAATATTGAA TAA
 
Protein sequence
MIIGIPKELK DQESRVAIIP GACTELTKSG NKVIIESGAG LASGISDEDY KEAGAEIVET 
AAEVWENADI IYKVKEPLKE EYKYFREGLI IYTYLHLASN PELTDALIEN KVTGIGFETV 
QLDGKLPLLR PMSEIAGRMA VQEGAQYLTK PKGGRGILLQ GVPGVRPANV VIVGAGTVGT 
AATRIAVGMG ARVTVLDVNI EALTQLHNIF PDKIETLYSN PLNIEDAVKN ADLVISTVLI 
PGARAPQLIK EDMVKQMKEG SVIVDVAIDQ GGSTDLTKGR PTSHTNPTFI EHGVIHYAVA 
NIPGAVAMTS TYALSNATTK YAKALADLGL KGACERFPEL IKGINTYEGK VTYEPVAEAN 
DKEYVELNIE