Gene Apre_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1393 
Symbol 
ID8398203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1494498 
End bp1495127 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content38% 
IMG OID644995758 
Productprotein of unknown function DUF208 
Protein accessionYP_003153137 
Protein GI257066881 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000049493 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA TCAACTACAA TCTCAAGATG GAAGAGATTA TAAAAGAAAA CAAGAAAAAG 
GGCCTAAGGC CAAGGCTTTT GATGCAGGTC TGCTGTGCTC CTTGCTCAAC TGCGGTTATA 
GAGAGGATAT ATGAGGATTT TGAGATTGAT CTTTTCTATT ATAATCCCAT GATCTATCCT 
ACAAGTGAGC TAGAAAAAAG GGTGGATACC CTAAGAAACT TAAAGGAGGC TCTTGGCATA 
GAGTCTAGGA TAATCTTTCC TCCAAATGAC ATATCTGACT TTGCTGAGAT TGCAAAGCTT 
AGGAGGGATG ACCATGAGGG GGGAGAGGCC TGCTATAAAT GTTATAGGTT AAGGCTAGAA 
GAGACGGCAA AGTTTGCCCA AAAAAATTAC TACGATTACT TTTCTACTAC TCTTTCGATT 
TCTCCTTACA AAAACAGCCA GTGGCTTAAT GAGATAGGGG AGAGTTTGGA GAAGGAATAT 
GGGGTAAAAT ATCTTTATTC AGACTTTAAG AAGAAAAATG GCTACAAGAA ATCCATAGAG 
CTTTCAAACA AGTACGAGCT CTACAGACAA GACTATTGCG GTTGTATTTT CTCCTTTAAG 
GAAATGGAAG AAAAGCATAA GAATTTATAG
 
Protein sequence
MQKINYNLKM EEIIKENKKK GLRPRLLMQV CCAPCSTAVI ERIYEDFEID LFYYNPMIYP 
TSELEKRVDT LRNLKEALGI ESRIIFPPND ISDFAEIAKL RRDDHEGGEA CYKCYRLRLE 
ETAKFAQKNY YDYFSTTLSI SPYKNSQWLN EIGESLEKEY GVKYLYSDFK KKNGYKKSIE 
LSNKYELYRQ DYCGCIFSFK EMEEKHKNL