Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1382 |
Symbol | |
ID | 8398192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1486758 |
End bp | 1487309 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644995747 |
Product | Tripartite ATP-independent periplasmic transporter DctQ component |
Protein accession | YP_003153126 |
Protein GI | 257066870 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000585397 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA CCTTAGACAA TATATTGAAA GTCCTAACAG GGGCAAGTCT TTTGATCATG TTTATCCTCG TAGTATGGCA AGTATTTACA AGATACGTCC TAAATAATCC ATCTACCTGG TCAGAAGAAT TGGTAGCTTA TCTATTTGCA TGGTCAACCC TCTTTGGTGC AAGTCTTGTA GTAAGCGAGA AAGGTCATAT GAATATACCA GTTCTAGTAG AAAAAAGAGA GCCAAAGACT CAAAAGGTCC TTAAAATCTT TGGAGAGCTT ATGATCTTGA TTTTCTCCCT AACAGTTCTA ACCATGGGAG GAATCGCTAT AACTAAGCTT GCTCTAAGTC AGACGACCTC ATCCCTAACT ATAGCAGTAG GATATTTCTA CATTCCACTT CCTATTACTG GAATTATTAA TATTTGCTAT ACGATAATGA ACATTAAAGA TATCCTTGCC GGCAAGGAAA AGTTTGTAAA GGCCAAATCA ACCGAAGAAA TTGCTTCAAA TATGGCCAAT GAAACAGAAG AAGTAGCCAA ATATGAAGGA GGTAAAAAAT GA
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Protein sequence | MRKTLDNILK VLTGASLLIM FILVVWQVFT RYVLNNPSTW SEELVAYLFA WSTLFGASLV VSEKGHMNIP VLVEKREPKT QKVLKIFGEL MILIFSLTVL TMGGIAITKL ALSQTTSSLT IAVGYFYIPL PITGIINICY TIMNIKDILA GKEKFVKAKS TEEIASNMAN ETEEVAKYEG GKK
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