Gene Apre_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1382 
Symbol 
ID8398192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1486758 
End bp1487309 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content37% 
IMG OID644995747 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_003153126 
Protein GI257066870 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000585397 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA CCTTAGACAA TATATTGAAA GTCCTAACAG GGGCAAGTCT TTTGATCATG 
TTTATCCTCG TAGTATGGCA AGTATTTACA AGATACGTCC TAAATAATCC ATCTACCTGG
TCAGAAGAAT TGGTAGCTTA TCTATTTGCA TGGTCAACCC TCTTTGGTGC AAGTCTTGTA
GTAAGCGAGA AAGGTCATAT GAATATACCA GTTCTAGTAG AAAAAAGAGA GCCAAAGACT
CAAAAGGTCC TTAAAATCTT TGGAGAGCTT ATGATCTTGA TTTTCTCCCT AACAGTTCTA
ACCATGGGAG GAATCGCTAT AACTAAGCTT GCTCTAAGTC AGACGACCTC ATCCCTAACT
ATAGCAGTAG GATATTTCTA CATTCCACTT CCTATTACTG GAATTATTAA TATTTGCTAT
ACGATAATGA ACATTAAAGA TATCCTTGCC GGCAAGGAAA AGTTTGTAAA GGCCAAATCA
ACCGAAGAAA TTGCTTCAAA TATGGCCAAT GAAACAGAAG AAGTAGCCAA ATATGAAGGA
GGTAAAAAAT GA
 
Protein sequence
MRKTLDNILK VLTGASLLIM FILVVWQVFT RYVLNNPSTW SEELVAYLFA WSTLFGASLV 
VSEKGHMNIP VLVEKREPKT QKVLKIFGEL MILIFSLTVL TMGGIAITKL ALSQTTSSLT
IAVGYFYIPL PITGIINICY TIMNIKDILA GKEKFVKAKS TEEIASNMAN ETEEVAKYEG
GKK