| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1363 |
|---|
| Symbol | hisS |
|---|
| ID | 8398170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1464491 |
|---|
| End bp | 1465777 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644995725 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_003153107 |
|---|
| Protein GI | 257066851 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000622801 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTG TAAAACCATC TACAATTGCT GGGGTAATGG AACTTTTACC TAAGGAGCAA
TTAGTTTTTG ACAAGATTAA AAGCATAGTC GAAGAAACTT ACAAGAAATA TCAATTTATG
CCAATCGATA CACCAGTTAT CGAGAAAAAT GAGATACTTT TTGCCAAGGG AGGCGGAGAA
ACTGAAAAAC AAATCTATGA AATAGCTTCT GACTCTAAGG ATATGAGCTT AAGGTTTGAT
CTTACAGTTC CTCTAGCACG TTACGTATCA GAGCACTTCC AAGACTTGAA TTTCCCTTTC
AAACGCTATC ACATAGGAAG AGTCTACAGG GGTGAGAGAA ATCAAAAGGG AAGATATAGG
GAATTCTACC AGGCTGATAT AGATATCATT GGTCACAACA GTCTTTCAAT CTACAACGAC
GCCCTCCTTC CTAGGGTTAT CTTTGAGATT TTTGAAAAAT TAAATTTCTC TGATCTTACC
TTCAAGATCA ATAACAGAAA GCTTTTGAAT GGATTTTTCA AATCCTTGGG TATAGAAGAT
ACAACAGATG TCCTTAGGAC AATTGATAAG AAAGATAAGA TTGGAATTGA CAAAACTTTT
GATGAATTAG TTAGAATCAC TGACGAGAAA AAAGCTAGGA CAATCATAGA ATTTATAGAA
AACAAAGATT CCAATAAAGA ACTTTTATCT AAGTTATTTG ACTTTTCTAC TGATGAGCTT
TTCCTTGAAG GAGTTGACGA GCTAAATAAG GTCTACACCT ACATGGTTGA TCTAGGTATA
CCTGATAGAA ATATCAAAAT CGACCTTGCC ATAACAAGAG GGCTAGATTA TTATACATCT
ACAGTCTATG AGACCTTTAT CAATGGCTAT GAGAAGATTG GTTCTGTCTG CTCTGGGGGA
AGATATGAGG ATTTAGCAAG TAATTTCTCC AAGCAGAAAC TTCCAGGAGT TGGCATGTCA
ATCGGTCTTA CAAGACTTTT CTACCAATTC CAAGAGCTTG GACTAATAGA TGAGAAAATC
AAGAGCCTAA CAGATATCCT GGTTATCCCA ATGGATGAGT CAATTAATGA GTACGGCATA
GAAATTTTAA ATAAACTAAG GGATTCTGGC GAAAGTGTCG ATATCTATCT TGAAAGCGGC
AAGTTTAAGA AGAAGATGAA CTATGCAGAT AAGTGCGGAA TCAGGAAAGT CATCATCTTA
GGTGAAGAAG AGATGAGCAA GAGAGAGTAT TCTATAAAGG ATATGGAAAC TGGCGAGCAA
GTTACTAAAA AATTCGAAGA ACTTTGA
|
|---|
| Protein sequence | MNIVKPSTIA GVMELLPKEQ LVFDKIKSIV EETYKKYQFM PIDTPVIEKN EILFAKGGGE
TEKQIYEIAS DSKDMSLRFD LTVPLARYVS EHFQDLNFPF KRYHIGRVYR GERNQKGRYR
EFYQADIDII GHNSLSIYND ALLPRVIFEI FEKLNFSDLT FKINNRKLLN GFFKSLGIED
TTDVLRTIDK KDKIGIDKTF DELVRITDEK KARTIIEFIE NKDSNKELLS KLFDFSTDEL
FLEGVDELNK VYTYMVDLGI PDRNIKIDLA ITRGLDYYTS TVYETFINGY EKIGSVCSGG
RYEDLASNFS KQKLPGVGMS IGLTRLFYQF QELGLIDEKI KSLTDILVIP MDESINEYGI
EILNKLRDSG ESVDIYLESG KFKKKMNYAD KCGIRKVIIL GEEEMSKREY SIKDMETGEQ
VTKKFEEL
|
|---|
| |