Gene Apre_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1360 
Symbol 
ID8398167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1461649 
End bp1462872 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content29% 
IMG OID644995722 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_003153104 
Protein GI257066848 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000458925 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCTA TAGGAATAGA TATAGCAAAA GAAAAGTTTA CAGTCTGTGC ACTAGAACAA 
GGTAGCAAAA TCATTTGGAA GCCTTTTGAT GTTCATCTTA ACAAAACAAA AGTAGAAGAA
TTTTTAAAGA AACTAGATAC GTTAAATGAA GAAGTAAAAA TAATCATGGA AGCAACAGGT
AAATATCATC TTCCAATCCT CTATGAATTA AAAGATAAAG AATATTTTGT AAGTGTAGTA
AACCCTTTGA AAATGAAACA GTTTTGTAGA GTACTTAACT TTAGAAAAGC AAAAAATGAT
AACATAGATG CCATACAAAT AGCAGAATAT GGCTTGATGT ACTGGAAAGA ATTACAAGAA
TATAAAGTAG ATTCAGAAAG TTTCAGAATT CTAAAAGAAT TAAACAGATC CTATCAGCAC
TACATGGACT TAAGAATCAA TCAAATGAAC TTCATAGATC AAACAATAAG TCAAACATTT
CCAGGAATAA AGAAATTAAT ACCACATGCT TCAGGAGACT TTTCAAAAGA TAAACTATTA
GACTTCTTAG AAATATGGTG GCACAAAGAC CTAGTATTAG AAAAACCAGA AGAAAAATTC
ATAGAAGATT TTAAAAACTG GGCAAAAGAA AAGAGATACC ATCCTAATGC TGATAAAGCT
AAATCCATAT ACAAGCTCGC AGAGGAAAGT ATCTCAATTC AACCTTCTAA TAGCTCATAT
ATAAAGACTA GCATACAAGA AGGGATAGAA TTGATAAAAC ATATAAATCA AATTCTACAT
ACTATTTTAT CACAAATGAT AGAAATTTCC GAGCCCTTAG AAGAATATCA AGAAGCAAAG
AAATTCTCAG GAATATCAGA TAAATTAGCA GTGCAAATTA CAGCAGAATT TGGAGACTTA
TCAAAATTTA AAAACAAAAA AAGTTTAATA TCATTTGTAG GAATAGATTC ACCACCATAT
GAGTCAGGTA ACTTCAAAGC GGATCAGAGA AAAATAACAA AAAGAGGCAA TGCAATACTA
AGAAAAGTAG GTTATCAAGC TATGAAATGC ATGATGAGTG CAAAAGATAC TGAAAATGAT
ATATATCTGT ATATGGTAAA AAAAGAAAAA GATGGAAAGG CTAAGAAGAT TTGTAAATTT
GCAGGATTAA ATAAATTCTT AAGAACCTAC TATGCAAAAG TTATGGCATC AAAACAAGAA
AAGAAGTTAT TAAAAGTAGC CTAG
 
Protein sequence
MISIGIDIAK EKFTVCALEQ GSKIIWKPFD VHLNKTKVEE FLKKLDTLNE EVKIIMEATG 
KYHLPILYEL KDKEYFVSVV NPLKMKQFCR VLNFRKAKND NIDAIQIAEY GLMYWKELQE
YKVDSESFRI LKELNRSYQH YMDLRINQMN FIDQTISQTF PGIKKLIPHA SGDFSKDKLL
DFLEIWWHKD LVLEKPEEKF IEDFKNWAKE KRYHPNADKA KSIYKLAEES ISIQPSNSSY
IKTSIQEGIE LIKHINQILH TILSQMIEIS EPLEEYQEAK KFSGISDKLA VQITAEFGDL
SKFKNKKSLI SFVGIDSPPY ESGNFKADQR KITKRGNAIL RKVGYQAMKC MMSAKDTEND
IYLYMVKKEK DGKAKKICKF AGLNKFLRTY YAKVMASKQE KKLLKVA