Gene Apre_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1348 
Symbol 
ID8398155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp1449580 
End bp1450059 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content37% 
IMG OID644995710 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_003153092 
Protein GI257066836 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0192059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AAATTAAAAC TAATGCCATG AGAATTTTAG ACAATTTGAA TATAGATTAC 
GAACACGTTG ATTATGAGTT AGAAGGAGAC TTTACTTCTG CAGTAGATAT AGCAGAAAAA 
ACTCACGAGG ATATAGATAT AGTCTATAAG ACTCTTGCAA CTATTTCTAA AGACAAGGAA 
GTCTTCGTCC TCGTAATACC TGCGGCAGAT TCTATAGACT TCAAAAAGGC TGCGAGAGCC 
TGCGGAGTAA AAAGCCTTTC TATGCTCCAC CTTAAAGATC TTAAGAAAAC CGTAGGCTAT 
GAGAGGGGAG CTACAACAGC GATTGCTATG AAAAAGGACT ATCCTGTAGT CCTTGACGAA 
AAGGCAAGAA ATCACAATAT AATCAAAGTA TCTGCTGGCA AAATCGGTCA CGGCTTAAAA 
CTTAGACCTG ATGATTTTAT AAAGGCAACT AAGGGCAAAT ATGAGGATAT TACCCAATGA
 
Protein sequence
MKKEIKTNAM RILDNLNIDY EHVDYELEGD FTSAVDIAEK THEDIDIVYK TLATISKDKE 
VFVLVIPAAD SIDFKKAARA CGVKSLSMLH LKDLKKTVGY ERGATTAIAM KKDYPVVLDE 
KARNHNIIKV SAGKIGHGLK LRPDDFIKAT KGKYEDITQ