Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1327 |
Symbol | |
ID | 8398119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1417516 |
End bp | 1418835 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644995674 |
Product | electron transport complex, RnfABCDGE type, C subunit |
Protein accession | YP_003153071 |
Protein GI | 257066815 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000291101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTCCA TTACTTTTAA AAATGGAGTG CACATGGAGG AGTATAAGGA GCTTACTGAA AACAGTGAAC TTCATATAGC AAGTATTCCT AAACTTGTAA CAATTCCTCT TGTCCAACAC ATAGGTGCAC CTAGCAAATG TCTTGTAGCA AAAAAAGACG AAGTTAGTGT AGGTCAGCTT ATAGGAGCAG CTGTCGGAAA TTTCTCTGCA AACATCCACT CATCAGTAGC AGGAGTGGTA AAGGACATTA TCGATTTACA AACTGCCTCA GGCAAAAACG CCAAGGCAGT CGTAATTGAT ACCGAAGGTT TCGACCAAGA TAAAGAATAC ATAGAAAAAG ATAATGTCGA CCTTAATGCA GAAGAAATAG TAGCAAAGAT CAAGGAAGCT GGAATAGTAG GTATGGGTGG AGCAGCCTTT CCTGCTCACA TAAAATATTT ACCAGCCAAG CCAGTAGATA CAGTAATAGT AAATGGGGCG GAGTGCGAAC CATATATTAC TTGCGATGAT TATCTAATGA AAAATAGGCC AGAAAGAATA CTTAAGGCCC TAAACCAAGC GATGAAGGCA GTAGGTGCTA AAAAGGGAAT TATCGCCATA GAAGATAATA AGCCAAAGGC CTTTGATACA ATGGTAAGCG CCTTAGAGAA ATTCGCTAAG GAAAATTCGT CATTTGATAT TGAAATTAAG AAACTTCAAA CAAAATATCC TCAAGGTGAC GAGAAAAGAA TCATAGATGT TTGCCTAAAC AGGCAAGTAC CAAGCGGTGG ACTTCCAATG GATGTTGGAG CTATAGTATC AAACGTTTCT ACAATGAATG CAATATACGA AGCAATTTAT ATGGATAAGC CACTTTACGA AAGGATCGTA ACAGTAACAG GTAAATCTGT CAAAAACCCA ACAAATATGT TAGTTCGTTG CGGAACAGAA TTCGGCTACC TTATAGAAGA AGCAGGTGGA GCAGATGATA TTGCTAAGCT TGTAAATGGT GGTCCAATGT GTGGTATTGC TCAACCAGAT CTAACTAGAC CAACAGAAAA AGCAAGCAAC TGCGTCCTAG TCCTAGCAAG TGATGAGGCC GAGCCTCTTG AAGTGAGCCC TTGCATCAGA TGCGGTAGGT GTGTTGATGT TTGTCCAGTT TACTTACTTC CACTCTACAT CCACAAGTTC TCCCTAGAAG AGAGATTCGA AAAAGCCCAA GAGCTTAATA TCATGGATTG TATAGAGTGC GGATCTTGTT CATTCGTTTG TCCATCAAAC AGACCTCTAG TAGAAGCTAT CAAGTTTGGT AAGAGACAAA TAAGACAAGC AGGTAAATAG
|
Protein sequence | MNSITFKNGV HMEEYKELTE NSELHIASIP KLVTIPLVQH IGAPSKCLVA KKDEVSVGQL IGAAVGNFSA NIHSSVAGVV KDIIDLQTAS GKNAKAVVID TEGFDQDKEY IEKDNVDLNA EEIVAKIKEA GIVGMGGAAF PAHIKYLPAK PVDTVIVNGA ECEPYITCDD YLMKNRPERI LKALNQAMKA VGAKKGIIAI EDNKPKAFDT MVSALEKFAK ENSSFDIEIK KLQTKYPQGD EKRIIDVCLN RQVPSGGLPM DVGAIVSNVS TMNAIYEAIY MDKPLYERIV TVTGKSVKNP TNMLVRCGTE FGYLIEEAGG ADDIAKLVNG GPMCGIAQPD LTRPTEKASN CVLVLASDEA EPLEVSPCIR CGRCVDVCPV YLLPLYIHKF SLEERFEKAQ ELNIMDCIEC GSCSFVCPSN RPLVEAIKFG KRQIRQAGK
|
| |