Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1326 |
Symbol | |
ID | 8398118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1416529 |
End bp | 1417506 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644995673 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_003153070 |
Protein GI | 257066814 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000145207 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA CAAAACAACT ATTGGTAACA GCTTCTCCTC ATGTTAGAAG CAATCGTACA GTTAAAAAGG ATATGCTAGA TGTAATTATA GCACTAATAC CAGCAGGGCT AGCCTCAGTA TATTACTTTG GCTACAGAGC CTTGATCTTA ATCCTAGCAT CTGTCATAAC TTGCGTGTTA TCAGAATATA TATTTAACAA AGCAACAAAG AGAAATCAAT CAATCAAAGA TTTATCAGCA GTAGTAACAG GAATCCTACT TGCCTACAAC GTTCCATTCA CCCTACCAGT ATGGCAAATG GTAATCGGAG CTATGTTTGC AATCATAGTA GCTAAGATGT TCTTTGGTGG AATCGGACAA AACATAGTAA ACCCTGCCCT TGCAGCAAGA GCCTTCCTAA TGGCTTCTTG GTCAGAAACT ATGACAAGCT TTGTACCACC ACAAAGAGTA GCAACCCTTA AGACTGTAAA AGACGTATCA ATGGTATCAG GAGCAACTCC TCTATCAGAT CCAGCAAGCT TCAGCACAAT GGATCTATTC CTCGGAAATA TCCCAGGATG TTTAGGAGAA GTATCTGCCC TTGCAATCTT AATCGGTGCA TGCTATCTAA TTGTAAGAAA GGTAATTCAC GTTAGAATCC CACTAACATA CATACTTACA GCGACAGTTT TATTAGGAAT CTTTGGTCCT GATGGTTTTG CTGCTTCCCT AAGAAATGTC CTATCAGGTG GTTTGTTACT AGGTGCCTTC TTTATGGCAA CTGACTATAC AACAACTCCA ATGACAATCA AAGGCCAATA TGTCTTTGCT ATAGGAGCAG GAATCCTTAC AGCCATTATA AGAGTTTGGG GTGGATATCC AGAAGGTGTA TCATACTCAA TTCTACTTAT GAACCTTGTA GTTCCTATAA TCGAAGCTCA CACAAGACCT AAGACTTTCG GTAAAGTTGA GGCAAAGAAA GGAAAAGAAA ATGAATAA
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Protein sequence | MENTKQLLVT ASPHVRSNRT VKKDMLDVII ALIPAGLASV YYFGYRALIL ILASVITCVL SEYIFNKATK RNQSIKDLSA VVTGILLAYN VPFTLPVWQM VIGAMFAIIV AKMFFGGIGQ NIVNPALAAR AFLMASWSET MTSFVPPQRV ATLKTVKDVS MVSGATPLSD PASFSTMDLF LGNIPGCLGE VSALAILIGA CYLIVRKVIH VRIPLTYILT ATVLLGIFGP DGFAASLRNV LSGGLLLGAF FMATDYTTTP MTIKGQYVFA IGAGILTAII RVWGGYPEGV SYSILLMNLV VPIIEAHTRP KTFGKVEAKK GKENE
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