Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1324 |
Symbol | |
ID | 8398116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1415335 |
End bp | 1415982 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995671 |
Product | electron transport complex, RnfABCDGE type, E subunit |
Protein accession | YP_003153068 |
Protein GI | 257066812 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000680415 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATC AAATTGATAG ACCAATAGAG AATAAAAAAG AAAAGAAAGC TCCTAAAGAA AATTTAGGAA AAGTCTTTAT CGAAGGAATA TTTGCTAATA ACCCAGTTTT CGTTCAAACA GTAGGTATGT GTTCAGTTCT TGCCATATCT TCTTCCTTGA TCAATGCTAT AGGAATGGGA GTATCAGTAA TATTCGTAGT AGTAATGAGT AACTTGGTAA TATCCTTACT AAGAAATTTC ATTTCAGATG AAATAAGAAT CCCTGCCTTT ATCGTAATTA TCGCAGGCTT CGTAACAATG GTACAAATGG CAATCAAAGC ATACTTGCCA GCCCTAGATG AATCCTTGGG TATCTTTATT CCACTAATAG TAGTTAACTG CTTGATCCTT GCTCGTGCGG AAGGTTTTGC TTCAAGTCAC GGACCAGTAG CATCAATCGT AGATGGACTT GGCCAAGGAC TAGGATACAC ATTTGCAATT TCCCTTCTAG CTTTCTTTAG AGAGCTTCTA GGAGCAGGAA CACTTTTCGG AGCTCAAATA ATTCCAGAAG CATACACAAT CGGATTCTTA CAACAACCAG CATCATCATT TATAGTTCTT GGTATGTTAG TTGCAGCATT TAATGCTATT TCAAAGAAGA GAAAATAA
|
Protein sequence | MENQIDRPIE NKKEKKAPKE NLGKVFIEGI FANNPVFVQT VGMCSVLAIS SSLINAIGMG VSVIFVVVMS NLVISLLRNF ISDEIRIPAF IVIIAGFVTM VQMAIKAYLP ALDESLGIFI PLIVVNCLIL ARAEGFASSH GPVASIVDGL GQGLGYTFAI SLLAFFRELL GAGTLFGAQI IPEAYTIGFL QQPASSFIVL GMLVAAFNAI SKKRK
|
| |