Gene Apre_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1320 
Symbol 
ID8398112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1412920 
End bp1413453 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content36% 
IMG OID644995667 
ProductHeptaprenyl diphosphate synthase component I 
Protein accessionYP_003153064 
Protein GI257066808 
COG category[S] Function unknown 
COG ID[COG4769] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000587453 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG ATATAAGAAA AATTACGACT ATGGCCCTAC TTGTCGCCAT GGCTCTAGCG 
ATTTCTTTAG TTGAACATTT TATTCCCCTA CCGATTCCAA TTCCAGGTGC AAAACTTGGA 
CTTTCAAATA TAATATTACT AGTAAGCTTG TACTTTTATG GACTTAGGGC AGCTCTTTTG 
ATTGGAGTAC TTAAATCATT CCTTTTGGTT TTAGCAACAG GTATGGTTAG CTCCTTCTTT 
TTTTCAGTAG CTGGGGCGAT TCTCGCAAGT ATTTCTATGA GCCTAGCTAT GAAATATCTC 
GACAAGAGCC TAAGCTTTAT AGGAGTAAGT GAAATTGGTG CTTTCTTCCA CAATTTTGGT 
CAAGTTTTAG TATCTGCCAT AGTTATGGAA AACATCAAGA TGTATTACTA TTTTCCACTT 
CTAGTCTTTA TTGGGACTTT TAGTGGATTC TTTGTAGGTC TCAGTTCAAA TTATCTTATA 
AGGCATATGG AAAAGATTGG ATTTGGTAGA AATGAAAGAG GCAAAGAGCT TTAA
 
Protein sequence
MNKDIRKITT MALLVAMALA ISLVEHFIPL PIPIPGAKLG LSNIILLVSL YFYGLRAALL 
IGVLKSFLLV LATGMVSSFF FSVAGAILAS ISMSLAMKYL DKSLSFIGVS EIGAFFHNFG 
QVLVSAIVME NIKMYYYFPL LVFIGTFSGF FVGLSSNYLI RHMEKIGFGR NERGKEL