Gene Apre_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1319 
Symbol 
ID8398111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1412256 
End bp1412942 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID644995666 
ProductDNA repair protein RadC 
Protein accessionYP_003153063 
Protein GI257066807 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000567698 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGG CAAAGAGCTT TAAAGACTTA GAAAAATACG ATAAGCCAAG GGAAAAGCTC 
ATCAGGGAAG GCTTTTCTTC CCTCACAGAT TATGAGCTTT TGGCAATAAT TTTATCTACA
GGTACTAAGG ATAAGAATGT AATAGAGTTA TCAAAGGAGA TACTTGAAGT CTTTTCCTAT
GAGGAACTTC TAGAAATTGA AGTTAAGGAA CTTACTGATA TTAAAGGAAT CAAGCAGGCC
AAGGCTACAA GAGTTGTTGC TGGCCTTCAG TTAGGTAAAA GGATTAACGA GAGGGTCCTA
GATAAGAAAA TAGAAAAGAT TACATCTAGC AAGGACGTCT ATGATATCAT GAGTCCTAGG
CTTTCTAATC TAAAGAAGGA ATACTTCTAT GCTATTTTAT TAGATAGCAA AAATGTTATC
ATAGCCAAGG AAGTAATTTC TATAGGAGAT CTCGGCTCTA CTGTAGTAAA CCCAAGGGAA
GTCTTTAAGC CTGCTATCAA AAAGAGTGCT AAATCAATGA TTTTAGTCCA CAACCATCCT
AGCGGAAATC CAAAGCCTTC GACTGAGGAC TTTCTCATCA CAGATAGGCT AGCAGAGGCT
GGGGATATTT TGGATATCAA GGTCCTAGAC CATATAGTTA TAGGAAATAG TAGTTATTAT
AGTTTTAAAA AAGAAGGGAA TTTGTAA
 
Protein sequence
MKEAKSFKDL EKYDKPREKL IREGFSSLTD YELLAIILST GTKDKNVIEL SKEILEVFSY 
EELLEIEVKE LTDIKGIKQA KATRVVAGLQ LGKRINERVL DKKIEKITSS KDVYDIMSPR
LSNLKKEYFY AILLDSKNVI IAKEVISIGD LGSTVVNPRE VFKPAIKKSA KSMILVHNHP
SGNPKPSTED FLITDRLAEA GDILDIKVLD HIVIGNSSYY SFKKEGNL