Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1319 |
Symbol | |
ID | 8398111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1412256 |
End bp | 1412942 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995666 |
Product | DNA repair protein RadC |
Protein accession | YP_003153063 |
Protein GI | 257066807 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000567698 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGG CAAAGAGCTT TAAAGACTTA GAAAAATACG ATAAGCCAAG GGAAAAGCTC ATCAGGGAAG GCTTTTCTTC CCTCACAGAT TATGAGCTTT TGGCAATAAT TTTATCTACA GGTACTAAGG ATAAGAATGT AATAGAGTTA TCAAAGGAGA TACTTGAAGT CTTTTCCTAT GAGGAACTTC TAGAAATTGA AGTTAAGGAA CTTACTGATA TTAAAGGAAT CAAGCAGGCC AAGGCTACAA GAGTTGTTGC TGGCCTTCAG TTAGGTAAAA GGATTAACGA GAGGGTCCTA GATAAGAAAA TAGAAAAGAT TACATCTAGC AAGGACGTCT ATGATATCAT GAGTCCTAGG CTTTCTAATC TAAAGAAGGA ATACTTCTAT GCTATTTTAT TAGATAGCAA AAATGTTATC ATAGCCAAGG AAGTAATTTC TATAGGAGAT CTCGGCTCTA CTGTAGTAAA CCCAAGGGAA GTCTTTAAGC CTGCTATCAA AAAGAGTGCT AAATCAATGA TTTTAGTCCA CAACCATCCT AGCGGAAATC CAAAGCCTTC GACTGAGGAC TTTCTCATCA CAGATAGGCT AGCAGAGGCT GGGGATATTT TGGATATCAA GGTCCTAGAC CATATAGTTA TAGGAAATAG TAGTTATTAT AGTTTTAAAA AAGAAGGGAA TTTGTAA
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Protein sequence | MKEAKSFKDL EKYDKPREKL IREGFSSLTD YELLAIILST GTKDKNVIEL SKEILEVFSY EELLEIEVKE LTDIKGIKQA KATRVVAGLQ LGKRINERVL DKKIEKITSS KDVYDIMSPR LSNLKKEYFY AILLDSKNVI IAKEVISIGD LGSTVVNPRE VFKPAIKKSA KSMILVHNHP SGNPKPSTED FLITDRLAEA GDILDIKVLD HIVIGNSSYY SFKKEGNL
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