Gene Apre_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1307 
Symbol 
ID8398097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1400279 
End bp1401394 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content33% 
IMG OID644995652 
ProductABC-2 type transporter 
Protein accessionYP_003153051 
Protein GI257066795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000398946 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTCT TTAAAAATTA TTTTAAAATC GTAAGAGGCC ACCTTAAGGC CATTGGCATA 
TACACAGTTA TATTTTTAGC CATAATATTT TTTTCAAATT CAAGTAATGA TGAGTCCATA
GACTATAAGA AGGCAAGAGC CGATATTTAT ATAGAAGATT TTGCCAAGAG CGACTTATCC
AAGGCCTTTA TCAAATATAT GGAAAAAGAA AATAATATAG TTGATATGAC TGGCAAAAAT
ATAGACGATA ATCTCTTTTA TGGGAAGATT TCCACCTATA TCAAGATTCC AGAGGACTTT
GATAAGGAAA AGAAGCTTGA GATTAAAAAT GGCATAAGCG GTAAGGATAG GCAGTATATA
AAAGAGTCAA TCAATCTATA CCTAGATCAG ATTTTGACCT ACGAAAAGGC AGGCTTTGAT
AAAAAAGAGA TAATAGCTAA TACAGAAGAA GACTTCAACA AAAGTGTTAA GGTTAGTCTA
AATAAGGATA GGAGACCGGT CGTAAGTAGC AAAGTCCATG ATTTCTTTAA CCTACTAGCC
TACGTATTTT TAAGCCAGAT CATCCTTGTA GTATCTTTAA TAAGCTTATC TTACAAGAAG
AGGGTTATAG CTATGAGAAA TGAAGCATCT CCTATAAGTA GCTTTAGGAA AAATTTTGAA
CTTCTTATGG GTCATTTTGC CTTTGCTCTT GTATCTTGGG TCTTTTATGT AATAATTTTC
CTTATTATGA ATGGAAGGTC ATCCCTAAGC ACAAGGGTTC TTCTAATGAT AGTAAATTCT
ATGATATTTG CCCTAAGTAC GGTAAGCCTC GCTATCTTTA TCACAAAACT TATAGAAAGT
GAAAATGCTA TGATGGCTGT AATGAATGTT TTCGCCCTAG CTTCGTCTTT TCTAACAGGA
GTATTTGTCC CACAAGAAAT CCTTAGCGAA AAGGCCCTAA TGATAGGAAA AGTCTTCCCA
AGCTTTTACT ATATAGCTAA CAATGACATC TTAGTGAGTG ATTTTAATAA GGAGATCTTT
ATTAGAAATA TTGCAATCCT TATAGGATAT ATAATAATTC TTTTCTTTTT GAGCTTAGCT
TTGGATAAAA TCTTGTTAAG AAAAAAATAT AGATAG
 
Protein sequence
MIVFKNYFKI VRGHLKAIGI YTVIFLAIIF FSNSSNDESI DYKKARADIY IEDFAKSDLS 
KAFIKYMEKE NNIVDMTGKN IDDNLFYGKI STYIKIPEDF DKEKKLEIKN GISGKDRQYI
KESINLYLDQ ILTYEKAGFD KKEIIANTEE DFNKSVKVSL NKDRRPVVSS KVHDFFNLLA
YVFLSQIILV VSLISLSYKK RVIAMRNEAS PISSFRKNFE LLMGHFAFAL VSWVFYVIIF
LIMNGRSSLS TRVLLMIVNS MIFALSTVSL AIFITKLIES ENAMMAVMNV FALASSFLTG
VFVPQEILSE KALMIGKVFP SFYYIANNDI LVSDFNKEIF IRNIAILIGY IIILFFLSLA
LDKILLRKKY R