Gene Apre_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1292 
Symbol 
ID8398082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1389672 
End bp1390301 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content40% 
IMG OID644995637 
ProductRibonuclease H 
Protein accessionYP_003153036 
Protein GI257066780 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000358144 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATT CACCATACGA TGATGCTATA AAGAAAAAGG TCCATGAAGA CTACGAGCTT 
ATAGCTGGTA TTGATGAAGT GGGCAGGGGA CCTCTGGCAG GTCCTGTAGT AACTTGTGCT 
GTGATTATGA AAAGAGATTC TAATATAGGA GGGGTTACAG ATTCGAAGAA GCTTACTAGA 
AAGAAGATGC TAAGTCTCAA GGAGAAGATC CTAGATGATG CCATAGACTT TGCCTATGGC 
TATGCCAATC CTTCTTTGAT TGATGAGCTT AATATCAAAA ACGCCACCCA TAAGGCCATG 
GAAGATGCCC TAAACAAACT TAAAATCCGC CCAGAAATCG TCCTAATCGA TGCAGAAAGG 
ATAAATACCG ATATTCCTCA GATGAATATA GTAAAGGGAG ACCTAAATGA ATATGTCATT 
TCTTGTGCAT CAATTCTTGC CAAGGTCAGA CGTGATGATA TTATGATCAA TTTCTCAAAA 
ATCTATCCTG GCTATTCTTT CGAGACTAAT ATGGGATATG GGACGAAAAA GCACTACGAG 
GGTCTAGAAA AGTACGGAGA AACTCCTATC CACAGGCAGA CTTTCTTGAG GAAGTTCCAC 
GAAAGACAGC TTAGTATCTA TGACCTATAA
 
Protein sequence
MRYSPYDDAI KKKVHEDYEL IAGIDEVGRG PLAGPVVTCA VIMKRDSNIG GVTDSKKLTR 
KKMLSLKEKI LDDAIDFAYG YANPSLIDEL NIKNATHKAM EDALNKLKIR PEIVLIDAER 
INTDIPQMNI VKGDLNEYVI SCASILAKVR RDDIMINFSK IYPGYSFETN MGYGTKKHYE 
GLEKYGETPI HRQTFLRKFH ERQLSIYDL