Gene Apre_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1291 
Symbol 
ID8398081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1389335 
End bp1389682 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content38% 
IMG OID644995636 
Productprotein of unknown function UPF0102 
Protein accessionYP_003153035 
Protein GI257066779 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000677509 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATA AGAAAGAATT TGGAGATTAT GGGGAAAATC TCGTCGAAGG CTACCTAAAG 
GATAAGTCCT ACGAGATTCT TGCTAGAAAT TACAGGAAGC CCTTCGGCGA GATAGATATA
GTGGCGAAGC TTTCCGATAT GATTGTTTTT GTAGAAGTTA AAACTAGGAA GAATGCTAAC
TTTGCAAGTC CTGCCGAAGC AGTTACTCCT AGTAAGCAAA GGAAAGTTAT CCAGGCAAGC
CAGGCCTTCC TTATAGAAAA TAATATGACA GATATGCTTA TGAGATTTGA TGTGGCTGAA
GTTATAGCGG ATAAGGGAGA GATTAATTAT ATAGAAAATG CCTTTTAA
 
Protein sequence
MTYKKEFGDY GENLVEGYLK DKSYEILARN YRKPFGEIDI VAKLSDMIVF VEVKTRKNAN 
FASPAEAVTP SKQRKVIQAS QAFLIENNMT DMLMRFDVAE VIADKGEINY IENAF