Gene Apre_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1285 
Symbol 
ID8398075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1382623 
End bp1383834 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content40% 
IMG OID644995630 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_003153029 
Protein GI257066773 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA AGAAAAATAT AACAGCCCTT ATCCTTTCCT TAATCCTGAT ACTTACTGGG 
ACGACTTCCC TTGCGGCAGG TGAAGGTAGG GTAGTAGGAC TTGATGACAA TGTTACAGCC
TACCTTATAG GAAATCAAGA AAATGGCGAC ATCTACTATG AGAAAAATGC CGACGAAGCC
CTACCTATGG CTTCTCTTAC CAAACTTATG ACCTTTCTTC TAGTAAGAGA TGCAATGGAT
GCGGGAAAAA TTGATCTAAA CACCAGTGTC AAGGCAGATA AGAGGGCAGA AGAGCTTACT
AGCTGGGAGT ACTCCGCCCT AGGACTTAAG GAGAATGAAT CCTACTCGGT AGAGGAGCTC
CTCCAAGGTC TTATAGCAGT TAGTGGAAAC GACTGTGCCC ATCTTCTTGC CAAAACTGTC
GCAGGAAGCG AGGATAAATT TGCCCAGATG ATGAACCAGA AGGCAAAAGA TCTAGGACTT
ACTAGCCAAA AATACTACAA TGCTAGTGGA ATTGGTACAG ATGACGGCAA GGAAAATAAA
TCTTCTGCCA GAGACCTCTT CAAACTATCT TCTGAGATAG TAAAAAAATA CCCAGATATC
CTAAGATATT CGACCATGGA TGAGGTAAAC ATCCCAGGCA AGGGTATAAG GAAAAACTCC
ACCATTCCCC TAAGAGGAGA AATAAAGGGA GTAGACGGTC TAAAGACTGG AACCACAGAC
CAGGCAGGCT ACTGCTTGGT AACAACTACT GACATGAAAG AGCTCGATGG CAACGACGAG
TTTAGGACTA TAGGTGTAGT AATGGGAGCA GACCAAAAAG ATACCAGAGA TAGCGTAATG
AGCGATCTTA TTTATTATGT ATCCAGATAC TACTCATGCG AAAAAGTCTT AGATACCAAC
AAAAGCCTAG ATACCATAGA TGAAATTAGT GCCAAACAAG GCTATATCGA ATTATATCCA
AAAGAAAACC TAAGTATCAT ATCCAAAGAT GACAAGAAAG TAGCTACTAA GATTAGCCTA
AAGGATAAGA TTAAGGCCCC AATCAAAGAA GGAGAAGTCC TAGGCCAGGT AGATGTATCC
TACGGCAACG AAGACCATAC CATCGATCTT ATAGCTAAAA AGGACGTTGA AGAAGCAAGT
TTATTTTCAA AAATCAAAAG AAATATAGAA AATAATATAA ATTTCTTGAT TCAAGTATTG
ATTGCAAGAT AA
 
Protein sequence
MKIKKNITAL ILSLILILTG TTSLAAGEGR VVGLDDNVTA YLIGNQENGD IYYEKNADEA 
LPMASLTKLM TFLLVRDAMD AGKIDLNTSV KADKRAEELT SWEYSALGLK ENESYSVEEL
LQGLIAVSGN DCAHLLAKTV AGSEDKFAQM MNQKAKDLGL TSQKYYNASG IGTDDGKENK
SSARDLFKLS SEIVKKYPDI LRYSTMDEVN IPGKGIRKNS TIPLRGEIKG VDGLKTGTTD
QAGYCLVTTT DMKELDGNDE FRTIGVVMGA DQKDTRDSVM SDLIYYVSRY YSCEKVLDTN
KSLDTIDEIS AKQGYIELYP KENLSIISKD DKKVATKISL KDKIKAPIKE GEVLGQVDVS
YGNEDHTIDL IAKKDVEEAS LFSKIKRNIE NNINFLIQVL IAR