Gene Apre_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1270 
Symbol 
ID8398059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1362045 
End bp1363244 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content31% 
IMG OID644995614 
Productprotein of unknown function DUF201 
Protein accessionYP_003153014 
Protein GI257066758 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.964812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TGATGATTTT AGGAGCTAGC GTTCTTCAAA TTCCAGCAAT CGTAGAGGCG 
AAAAAAATGG GGCTTTATGT GTTGGCTGTT GATATGAATC CTAATGCAGA AGGTTTTTCA
TATGCAGATA AAAAAATTGT AGTAAGCACT ACAGATACAG AAAAAGTATT AGAAGAAGCA
AAAAAAAATA AAATTGATGG GATAATCACA ATAGCTAGTG ATAGACCAAT GACAACTGTT
GCTAAAGTAG CAAAGAAATT AGATTTAATA GGAATAGACG AAAAAACTGC GATAAATGCT
ACTAATAAAT CAAAAATGAG GGATGCTTTA AAAGCTTATG GCGTACCAAT TCCTATGTAT
TTTTCTGTAG ATAACTATGA CCAATATTTA AAAGCCGTTG ATGAAATTAT AATGAAAAGT
TATAAATGTA TTATTAAACC TGAAGATAAC TCTGGAAGTA GAGGCATTAG GTTAGTGGAA
TCAACAGATG CATGCGATTT AAAGAAAATA TTCGATTATT GTAAAAGTAA TTCTAATTCG
GGCAAGCTGT TAGTTGAAGA ATACATGGAA GGACCAGAAG TAAGTGTAGA AACTATATCT
AAAGATGGTG TTTGTAATGT TATTCAAATT ACAGATAAAA TAACAACTGG CCCTCCGTAT
TTTGTAGAAT TAGGTCATTC ACAGCCATCA TCATTGGATA AAGAAACTAT AGATAAAATA
AAAAAAGTTG CAATAGACAC AAATAGAGCA ATAGGGATTG AAAATGGCCC ATCACATACT
GAAATAAAAG TTACAAAAGA TGGCCCTAAG GTCGTAGAAG TAGGTGCAAG ATTAGGAGGA
GATAATATTA CAACTCACCT AGTTCCATAT TCAACTGGGG TAAATATGGT GAAAGCTTCA
ATAAAAATTG CACTTGGACA AGAAATTGAT GTTAGAAAAA GTTTTGAAAA AGCATCAGTA
ATAAGATATA AAAAATGTGA TACTGGAAAA ATACTAAAGA TCAAAGGGAT CGAAGAAGCA
AAGGCAATAC AAGGAATTAT GGATGTAGAG ATAGTTCATG GAGTTGGAGA ATATTCTCAT
ACCATAAAAA ATTCAAATGA TAGAGTTGCC TATGTTATAT CTCAAGGTAA CGATATTACA
GAAGCAATAG AAGCATGTAA AAATGCTTTA GATAAGATAA AAATAGAAGT AGAAGAGTAA
 
Protein sequence
MKKLMILGAS VLQIPAIVEA KKMGLYVLAV DMNPNAEGFS YADKKIVVST TDTEKVLEEA 
KKNKIDGIIT IASDRPMTTV AKVAKKLDLI GIDEKTAINA TNKSKMRDAL KAYGVPIPMY
FSVDNYDQYL KAVDEIIMKS YKCIIKPEDN SGSRGIRLVE STDACDLKKI FDYCKSNSNS
GKLLVEEYME GPEVSVETIS KDGVCNVIQI TDKITTGPPY FVELGHSQPS SLDKETIDKI
KKVAIDTNRA IGIENGPSHT EIKVTKDGPK VVEVGARLGG DNITTHLVPY STGVNMVKAS
IKIALGQEID VRKSFEKASV IRYKKCDTGK ILKIKGIEEA KAIQGIMDVE IVHGVGEYSH
TIKNSNDRVA YVISQGNDIT EAIEACKNAL DKIKIEVEE