Gene Apre_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1259 
Symbol 
ID8398048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1351557 
End bp1352243 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content42% 
IMG OID644995604 
Productpeptidoglycan hydrolase 
Protein accessionYP_003153004 
Protein GI257066748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00682301 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTG TTGATAGAAT GATTGCCTTC GCCTTATCCA AGCATCACAA GGTGACCTAC 
TCTATGGCCT ATCCCCAAAG GCTGGGGCCA GAGGCCTTGG ACTGTTCGTC CTTTGTCTAC 
TATGCTTTGA TAGCTGGGGG ATTTCTCCCA AAGGAGACGA GGATTGGCAA TACTGAATCT 
CTATATAAGC TAAAGGGAAG AGTCTTTAGG GAGATTTATG ATTATAGAGA TGTAAGAAGG 
GGAGACATAT TCATAAGGGG AATCGAAGGC CATTCCGCCG GAGCCTATGG CCATACGGGG 
ATTTTTCTAA GGAAGGGATC CATAATTCAT TGTAATTACA CCAACAATGG GGTCTCCATA 
AATGATGAGG CTTCCTTTAT AGGATATTAT CTAAACTGTA GGAGATCATC CGAGGAGAGG 
TACTTTAGAC CTATCGGGAG AATTTCTCCA AGTAGGGGAG TGTGGAAGAA GGGATGTGCC 
CTAGTCCATG CTATAACTAA TGTTAGAGAG AGACCCTCGA CAAATAGTGA TATCATAACC 
CACTATTGTC CTGGAGATAA GATATATTAT GATTATCTGA TAGAAAATGA AGGATACTAT 
TGGCTATCTT ATATAGGAAA AGATAGTGGT CTTAGAAGAT ATGTCGCCTA CAAAGACAGC 
GAGGACAATA CTTGGATAGA TATTTAG
 
Protein sequence
MTSVDRMIAF ALSKHHKVTY SMAYPQRLGP EALDCSSFVY YALIAGGFLP KETRIGNTES 
LYKLKGRVFR EIYDYRDVRR GDIFIRGIEG HSAGAYGHTG IFLRKGSIIH CNYTNNGVSI 
NDEASFIGYY LNCRRSSEER YFRPIGRISP SRGVWKKGCA LVHAITNVRE RPSTNSDIIT 
HYCPGDKIYY DYLIENEGYY WLSYIGKDSG LRRYVAYKDS EDNTWIDI