Gene Apre_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1252 
Symbol 
ID8398041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1343574 
End bp1344548 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content38% 
IMG OID644995597 
Productribonuclease BN 
Protein accessionYP_003152997 
Protein GI257066741 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA ACAAGCCTAA GACAAAAAAC TTTCTCCTGA ATCTAATAAA TAGGGTAGCA 
AATCATGACA TAATGACCTA TTCCGCTGCC CTATCCTTCT ACCTCCTACA AGCATCCATA
CCACTTATTA TGGTTCTCGT AAGTGTACTG TCCTACTTTA TATCAGGTAG AGAGGATATC
ATATATAGAT TTTTGGACTT TTTACCCAAT ACCACAATAG AGCTAATAGC GGAAGTGATA
GATATCCTAC TTATCTCCTC CCAATCTCCA ACAGTGACAA CTATCACAAT TCTCTTTGCC
CTATGGTCTG CTACAAGTGG TATCAACAAG CTAGTAAATG CGATAAATCA CGCCTACGGC
CTCCACAAAC AAAAACAAGC TATCAAACAA AGACTAATGA GCGTACTCTT TACCCTTATT
TTCATAAGTC TGATAGTCTT TATGTTGATA TTTCAAATCT ATGGTACAAG CATAATAAAT
ATCTTCAATG CCCAAATCAT AGAGAAAATC ACCGTACATT TTAATACCAA TATCCAAAAG
GCCCTGGACA TGATATCTTC GCCCCTATTT AAGCTAATAA CCTTTGTCCT ACCCTTTCTC
ATAATGGCCA TAGCTATAGG AGTATTCTAC AGATACTCCC CTTCCAAGGC CAACAACAGA
ATAAGTGTCA AGGAAGCCTT CTGTGGAGGA TTGTTCGCAA CAGTTGCCAT ATTTATAGCA
AGCTTTATAT ACTCCTACTT CGTAAACAAC TACTCCAACC AGTCCCTAGT CTATGGAGCC
CTAGCAGGAA TCCTTGCCCT ATTTATCTGG CTTTTGATGG TATCAACCAT CATTATCCTA
GGAGCAGAAT GCATAGCAGC CTACAGGGAA GGCTACAAGG AAGACTTCTT CGACAAAGAA
GTAAATACAG AAGATGAGTC CAGCTTAAAA GACAACGTAA TAGAATTGAT AAGGAAAAAA
GGAAATGAAA AATGA
 
Protein sequence
MNKNKPKTKN FLLNLINRVA NHDIMTYSAA LSFYLLQASI PLIMVLVSVL SYFISGREDI 
IYRFLDFLPN TTIELIAEVI DILLISSQSP TVTTITILFA LWSATSGINK LVNAINHAYG
LHKQKQAIKQ RLMSVLFTLI FISLIVFMLI FQIYGTSIIN IFNAQIIEKI TVHFNTNIQK
ALDMISSPLF KLITFVLPFL IMAIAIGVFY RYSPSKANNR ISVKEAFCGG LFATVAIFIA
SFIYSYFVNN YSNQSLVYGA LAGILALFIW LLMVSTIIIL GAECIAAYRE GYKEDFFDKE
VNTEDESSLK DNVIELIRKK GNEK