Gene Apre_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1247 
Symbol 
ID8398036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1334863 
End bp1335945 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content39% 
IMG OID644995592 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003152992 
Protein GI257066736 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.258523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATA TAATACTAAC AGGTGACAGA CCAACAGGCA GACTTCACCT AGGACACTAT 
GTAGGAAGCT TAAAAAACAG AGTAATTATG CAAAATGAGG GTAATTACGA TAGGATGTAT 
ATCATGATTG CAGACAGTCA AGCCCTCACA GATAACTTCG ACGATCCAGG AAAAATTAGG 
GAAAATCTAA TAGAAGTAGC CCTAGACTAT CTTAGTGTGG GACTTGACCC AGAAAAGGTG 
ACCTTCTTCG TCCAATCCCA AGTCTCAGAG CTAACAGAGC TTACCTTCTA CTTCCTAAAT 
CTTGTTACCC TATCAAGACT CGAGAGAAAC CCTACAGTTA AGTCAGAAAT TAAACTAAGA 
GACTTTGAAA CATCTCTACC AGCAGGATTT CTAATATATC CTGTAAGCCA AGCTGCTGAT 
ATACTTCTCT TTGATGCAAA TATAGTTCCA GTAGGAGAAG ACCAAGAGCC AATGCTTGAG 
CAAGCAAGAG AGATTGCTAG AAGCTTCAAC CACATTTATG GAGAGACTTT CGTAGAGCCA 
AAGGCAGTTC TTCCAGAGGC AAAAATCGCA AGACGTATGC CAGGAATTGA TGGAGGAGCT 
AAGATGAGCA AGTCCTTGGG TAATGCAATC TACCTTGCAG ATGATAAGAA AACTGTCAAG 
AAAAAAGTAA TGAGCATGTA CACAGACCCA GACCATATCA ATATCGAAGA TCCAGGCAAG 
GTTGAAGGAA ATATCGTCTT TACCTATCTA GATGTATTCT CAAAACCTGA GCATTTTAAG 
GAATTCCTTC CTGAATACGA AAACCTAGAA GCTCTTAAAG ATCATTACAG AAGGGGAGGT 
CTGGGAGATG TAAAGGTTAA GAAATTCCTA ATCAAGGTCC TAGAAGACGA GCTAGAGCCA 
ATTAGAAAAA GACGTGCCGA ATACGAAAAA GACCTAGAAA AAGTATTTAA AATCCTAGAA 
GAAGGAACAG CAAAAGCAAG AGAAGCTGGA AGATCAAAGG TCGAAGAAGT AAAAAAAGCT 
ATGGGCATCA ACTACTTCGA AGACGAAAAG CTAGTAAAGA GCTTGCAGGA AAAATATAAA 
TAA
 
Protein sequence
MKDIILTGDR PTGRLHLGHY VGSLKNRVIM QNEGNYDRMY IMIADSQALT DNFDDPGKIR 
ENLIEVALDY LSVGLDPEKV TFFVQSQVSE LTELTFYFLN LVTLSRLERN PTVKSEIKLR 
DFETSLPAGF LIYPVSQAAD ILLFDANIVP VGEDQEPMLE QAREIARSFN HIYGETFVEP 
KAVLPEAKIA RRMPGIDGGA KMSKSLGNAI YLADDKKTVK KKVMSMYTDP DHINIEDPGK 
VEGNIVFTYL DVFSKPEHFK EFLPEYENLE ALKDHYRRGG LGDVKVKKFL IKVLEDELEP 
IRKRRAEYEK DLEKVFKILE EGTAKAREAG RSKVEEVKKA MGINYFEDEK LVKSLQEKYK