Gene Apre_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1237 
Symbol 
ID8398026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1319960 
End bp1320625 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content38% 
IMG OID644995582 
Productprotein of unknown function DUF969 
Protein accessionYP_003152982 
Protein GI257066726 
COG category[S] Function unknown 
COG ID[COG3819] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATA TTAAATTAAT AGGAATCCTG ATTATCGTAT TAGGTTTTAT ATTCAAACTG 
AATATAATCT TTACGGTTGT CCTATCAGGT TTCATCACAG CTTTGGTCTC AGGACTAAGT 
GTAAGCGAAT TCTTGTCGAT CTTAGGCGAT AGTTTTGTTT CCCAAAGAAT AGTAACCATA 
TTTATAATCA CTCTTCCAGT AATAGGACTA TCGGAAGAGC ACGGACTTAA GCAAGTGGCT 
GAAAACATAG TAAAGAAAAG AGAAAACCTT TCATCAGGTG CCCTTCTTTC AGTATACCTT 
GCCTTTAGGG AACTTGCTGG TTTCTTGTCA ATGAGAATAT ATGGTTTGGT CCAATTTGTT 
AGACCAATAA TCTTCCCAAT GACTCAAGCA TCAGCTGAGA AGAAAAAGGG TAAGCTTAGC 
GAAAAAGAAG TAGAAAGCCT AAAGGCTAGG GGAGCTGCCA TGGAAAACTT CGGTAACTTC 
TTTGCCCAAA ACACTTTCGT TGGAGCGGCA GGAGTTCTCA TGATGGTGGG AACTATGGCA 
GAGCTTGGCT ATAATGTTAC AAATATCGAG CTTAGCCAAT ATTCAATCCC TATAGCCCTT 
ATAACCCTAG TCCTTGGTAT TATCAAAAAT ATCATAGACG ATAAGAAGAT TAAGGGAGGT 
AAGTAG
 
Protein sequence
MEYIKLIGIL IIVLGFIFKL NIIFTVVLSG FITALVSGLS VSEFLSILGD SFVSQRIVTI 
FIITLPVIGL SEEHGLKQVA ENIVKKRENL SSGALLSVYL AFRELAGFLS MRIYGLVQFV 
RPIIFPMTQA SAEKKKGKLS EKEVESLKAR GAAMENFGNF FAQNTFVGAA GVLMMVGTMA 
ELGYNVTNIE LSQYSIPIAL ITLVLGIIKN IIDDKKIKGG K