| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1236 |
|---|
| Symbol | |
|---|
| ID | 8398025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1319030 |
|---|
| End bp | 1319959 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644995581 |
|---|
| Product | protein of unknown function DUF979 |
|---|
| Protein accession | YP_003152981 |
|---|
| Protein GI | 257066725 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3817] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGAG CAGAATTTTT TCCAATGTTT TTGGAGTTTA TCTTTGTAAT CATAGGCCTT
CAATTCTTCT ACACAGCCTA TAGGGTAAGT AGGGATCCTT CCAAGGAAAA GAAACTTACA
ACAATAATAT TCTGGATAAT CTTAGGAGTC CTCTTTGCTC TAGGAAAGGT AATTCCTTCA
GAGATAAGCG GAATTTTAGT TGTCCTAATA GCTATAATCT CCCTTGTCGA TGGAATAAAG
ATCAAGGGAA GTAAGTATGT AAGTGAGAAG ATTCAAATAG CATCTAGCAA AAGGCTTGGA
CTTAAGGTCT TCTTGCCAGT AATAATCATG GCAGTTCTTG CTATAGCAAT AGCAAAAATT
ATTCCGGAAT CATCATCTTC AGTCTTGGGT CTTACTGCAA TAATAGCAGT AGTATTTGCC
ATGGTCCTTA CAAAATCAAG CTTTAAGGAT ATGCTAGACT CATCTGATAG GATGGTTCAA
CAAGTAGGTG CAGTGGCAAT CCTACCACAG CTTTTGGCAG CACTTGGAGC AATCTTTGCT
GCAGCAGGAG TAGGTGATGT AATTGCTAAG ATTATCGGAG GAATTATCCC AACAGTCAAT
CCATGGACCG GGGCTATTGC CTATGTTTTG GGTATGGTAA TATTTACCAT GATTATGGGA
AATGCCTTCG CAGCCTTTAC AGTAATCACT GCAGGAATAG GAGTACCTTT TGTAATAGCC
CAAGGAGCAG ACCCAGCAAT AGCGGCAGCC CTTGCAATGA CATCAGGATA TTGTGGAACA
CTTCTTACAC CAATGGCAGG TAACTTCAAC CTCTTGCCAG TGGCCCTACT AGAGATGAAA
GATAAGAACA AAGTAATAAA AGAACAAGCC CTACTATCTA TAATATTAAT TGTAGTTCAC
ATACTACTTA TGAGATTTTG GGCGTTTTAG
|
|---|
| Protein sequence | MTRAEFFPMF LEFIFVIIGL QFFYTAYRVS RDPSKEKKLT TIIFWIILGV LFALGKVIPS
EISGILVVLI AIISLVDGIK IKGSKYVSEK IQIASSKRLG LKVFLPVIIM AVLAIAIAKI
IPESSSSVLG LTAIIAVVFA MVLTKSSFKD MLDSSDRMVQ QVGAVAILPQ LLAALGAIFA
AAGVGDVIAK IIGGIIPTVN PWTGAIAYVL GMVIFTMIMG NAFAAFTVIT AGIGVPFVIA
QGADPAIAAA LAMTSGYCGT LLTPMAGNFN LLPVALLEMK DKNKVIKEQA LLSIILIVVH
ILLMRFWAF
|
|---|
| |