| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1234 |
|---|
| Symbol | |
|---|
| ID | 8398023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1317167 |
|---|
| End bp | 1318174 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644995579 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003152979 |
|---|
| Protein GI | 257066723 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.34416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT TTTTAATAAT CGTATTAATC CTACTTATAC CTCAAGTCTA CTATTACATA
CAAGAAAGAA GGTATAGGTC GATTAATCTA GGCAAGAAAT TTTATAAGAA GTTTGACGTT
AGAAGTATTT CAAACTATAG AGAATATTAC CTAACAGGAG CAGATGGTTT CGATAGCTTT
GTAAGAGAGC TTGAAAATGA GAATCCAAAG GCAGTTGTTC AACTAGTTCA CGGGATGAGT
GAGCATGGTG GAAACTACAT GGATTTTGCA AAATATCTAA ATGATAATGG TTATGCGGTT
GTAATTCACG ATCATAGGGG GCATGGCAAG TCCTTAAGCG AAAGATATCC GAACGGCCAC
ATGCAAAGAG CAAGTGAGCT TGTAAATGAT ACATCTATGG TCACAAAATA TATAAAGACT
AAATATAAAG ATGTGCCAAT ATATATGCTG GGTCACTCTA TGGGATCTAT GACAGCTAGG
GTATTCTTGC AAGAAAATGA TGATTTGATA AGTAAACTTA TCCTAACTGG TACGCCACCC
CAAGACGGAT TTGCAAAAGT TGCCTTTTTC TTTGCAAATG TATTTTGCTT TTATATAGGA
AGTCATCAAA GATCAAATAT AATTAATCAT TTAGTTGGGA CTGGGGATGA TTCGCTAGAC
TTTATATCTT ATGATGAGAA AAATAGACAT GATAAATACA ATGATCCAAT GAGAATCTTT
AACTTTACCA TAGGTTACAC TAAGGTTTTG ATAGAAATAA ATAAAAAACT ATCTCAAAAA
TCAAAATATA GGATGAAGAA CAGATCTCTT CCAATATATA ACTTAACTGG AAGAGATGAT
ATGATAACTA AGGGTGAGAA GGGAGTAAGT AGATCTCTAA AGCTCCTAAA GGATTTGGGA
TATAAAAATA TAGGAAGCAA AACCTACGAC AAGATGCGCC ATGAGATCCT AAATGAAACA
GATAAGGATA TAGTTTATGA AGATATTTTA AAAATATTAG AAGATTAA
|
|---|
| Protein sequence | MKYFLIIVLI LLIPQVYYYI QERRYRSINL GKKFYKKFDV RSISNYREYY LTGADGFDSF
VRELENENPK AVVQLVHGMS EHGGNYMDFA KYLNDNGYAV VIHDHRGHGK SLSERYPNGH
MQRASELVND TSMVTKYIKT KYKDVPIYML GHSMGSMTAR VFLQENDDLI SKLILTGTPP
QDGFAKVAFF FANVFCFYIG SHQRSNIINH LVGTGDDSLD FISYDEKNRH DKYNDPMRIF
NFTIGYTKVL IEINKKLSQK SKYRMKNRSL PIYNLTGRDD MITKGEKGVS RSLKLLKDLG
YKNIGSKTYD KMRHEILNET DKDIVYEDIL KILED
|
|---|
| |